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NECEvent2014_4_6_scaffold_288_3

Organism: NECEvent2014_4_6_Clostridium_7_2_43FAA-rel_29_12_partial

near complete RP 47 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 1519..2325

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-G factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H429_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 260.0
  • Bit_score: 491
  • Evalue 4.90e-136
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 260.0
  • Bit_score: 491
  • Evalue 6.80e-136
sigG; RNA polymerase sigma-G factor similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 258.0
  • Bit_score: 469
  • Evalue 7.30e-130

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 807
ATGTTATTACTTCATAAGGAGTTGATAAGCTTGATTATTAATAAGGTAGAAATATGTGGAGTGAATACATCCAAGTTACCTGTATTAAAAGAGAAAGAAAAAAGAGAGCTACTTTTAAAGATGAGAGATGATGGAGATAAAAGTGCTAGGGAATCATTTATAAAAGGAAATTTAAGATTAGTTTTAAGTGTAATTCAAAGATTTAATAATAGAGGTGAAAATGTTGATGATTTATTTCAAGTTGGATGTATTGGCTTAATGAAAGCTATTGATAATTTCGATTTAGGTCAAAATGTAAAATTTTCTACCTATGCAGTTCCTATGATTATAGGAGAAATAAGACGATATTTAAGAGATAATAACTCTATTAGAGTAAGTAGATCCTTAAGGGATATTGCATACAAGGCATTGCTCGTAAGAGATAAGCTAATTAAAGATAATAATAAGGAACCGACTGTATCACAAATTGCAAAAGAACTTAACTTACCTAGAGAAGAAGTTGTATTTGCATTAGATGCTATTCAAGATCCGGTGTCTTTGTTTGAACCGATTTACCACGATGGCGGAGATGCAATATATGTAATGGATCAAATAAGCGATTCTAAAAATACTGATGAAAGTTGGCTTGAGAATATTTCCATAAAAGAGGCTATGAAAAAACTTAATGACAGAGAAAAACTTATACTAACTTTACGATTTTTTAATGGAAGAACTCAAATGGAAGTGGCTGATGAAATTGGAATTTCACAAGCTCAAGTATCACGATTGGAAAAAACTGCATTAAAGCATATGAGAAAATATGTTTAG
PROTEIN sequence
Length: 269
MLLLHKELISLIINKVEICGVNTSKLPVLKEKEKRELLLKMRDDGDKSARESFIKGNLRLVLSVIQRFNNRGENVDDLFQVGCIGLMKAIDNFDLGQNVKFSTYAVPMIIGEIRRYLRDNNSIRVSRSLRDIAYKALLVRDKLIKDNNKEPTVSQIAKELNLPREEVVFALDAIQDPVSLFEPIYHDGGDAIYVMDQISDSKNTDESWLENISIKEAMKKLNDREKLILTLRFFNGRTQMEVADEIGISQAQVSRLEKTALKHMRKYV*