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NECEvent2014_4_6_scaffold_304_1

Organism: NECEvent2014_4_6_Clostridium_7_2_43FAA-rel_29_12_partial

near complete RP 47 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 52..1092

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 345.0
  • Bit_score: 560
  • Evalue 2.00e-156
tRNA dihydrouridine synthase A n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2Z7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 345.0
  • Bit_score: 560
  • Evalue 1.40e-156
  • rbh
dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 331.0
  • Bit_score: 344
  • Evalue 4.60e-92

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1041
ATGGAAAAATATTTATCAAATATTGTGACTCCTAAAGTTAGTATTGCTCCTATGGTTGATAAAACTCATAGGCACTTTAGATATTTTGCAAGAATTCTAACTGAAGAAGCTCTTTTATATACAGAAATGGTAACTGCTCAATCTATAATAAATGGAGATATAAATAAAATTCTATATTTTAGAGAAGAAGAAGGTCAAGTTGCTCTTCAAATTGCTGCTTCAAACCCAGAAGATGCATATAAGGCTGTAAAGTTAGCTGAAGACTTTAATTATAGTGAGATAAATTTAAACTGCGGTTGTCCGTCTGATAGAGTTTCAGGTAATTTGATGGGGGCAGCTTTGATGTCTTCTAAAAACTTAGTTTATGAAATCTTATCCGCTATGAAAGAAGCAACAAATAAACCAGTTACAATAAAGCATAGAATTGGAATTGATGGGACAGGTATCTTAGAGGGTACAAGTGATAAAATAATTATGGAAGGATATAATGACCTTTTAGACTTTTTAGATACTGTATCAAAGGCTAAGCCTGACAGATACACAATCCATGCTCGTTCTGCAATCCTTAAAGGATTAAGTCCTAAAGATAATAGAGAAATCCCACCTTTAGACTATAATATGGTTTATAGACTTAAAGAGGAATTTGATTATTTAAACATAGAAATTAATGGTGGCTTTAAAACTATTGAAGATATAAAATCAGCATTAACTAAAGTGGATGGGGTGATGATTGGAAGATCTGCTTATGAGGACTGCTATCTTTTATCAAACTTTTTTAAACTTTATGATTACTCTGAAGATAAAAAACCTATTTCTAGGGGAGAAGCTATAAAATCATATATTCCTTACATAATTAAGGAACTTGAAAAAGGAAGCAGTGTTCATGCCTTAGTTTCACCTTTACATAGCTTATTCCAAGGAGTAAAAGGGAGCAAAAAATATAAACAACTTTTATCTTCTTCAAATGTAAAAAAAGATACAATAGTAGATATTTTAAATACAATTTTAGAAAATATGCCTGAAAGTATCTTATGGTGATAA
PROTEIN sequence
Length: 347
MEKYLSNIVTPKVSIAPMVDKTHRHFRYFARILTEEALLYTEMVTAQSIINGDINKILYFREEEGQVALQIAASNPEDAYKAVKLAEDFNYSEINLNCGCPSDRVSGNLMGAALMSSKNLVYEILSAMKEATNKPVTIKHRIGIDGTGILEGTSDKIIMEGYNDLLDFLDTVSKAKPDRYTIHARSAILKGLSPKDNREIPPLDYNMVYRLKEEFDYLNIEINGGFKTIEDIKSALTKVDGVMIGRSAYEDCYLLSNFFKLYDYSEDKKPISRGEAIKSYIPYIIKELEKGSSVHALVSPLHSLFQGVKGSKKYKQLLSSSNVKKDTIVDILNTILENMPESILW**