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NECEvent2014_4_6_scaffold_340_4

Organism: NECEvent2014_4_6_Clostridium_7_2_43FAA-rel_29_12_partial

near complete RP 47 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 2922..3854

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100 similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 310.0
  • Bit_score: 559
  • Evalue 4.00e-156
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199) similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 310.0
  • Bit_score: 505
  • Evalue 1.40e-140
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFT8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 310.0
  • Bit_score: 559
  • Evalue 2.90e-156
  • rbh

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 933
ATGGAATTTAAACATGTGTCAGTTTTATTAAATGAGTGTATAGAGGGATTAAATATAAAAGAGAATGGTATATATGTAGATGGCACTTTAGGTGGAGGAGGACATTCTCTAGAAATACTAAAGAATTTATCTAGTGAAGGATTATTAATTGGAATAGACCAAGATACAGATGCTTTAAAAGCAGCTGGTGTAAGGTTACAAGATTTCAGTAATGTAAAATATGTTCATAGTAATTTTTATAATATAGATAAAGTTTTAAATGATTTAGAAATAGAAAAGATAGATGGAATGCTAATGGATCTTGGAGTTTCATCCTATCAGTTAGATACTGGTGATAGAGGCTTTAGCTATATGCAAGATGCAGAACTAGATATGAGAATGAACAGGGAAAATGATTTATCTGCTTATGAAGTAGTAAATGATTACTCAGAAGAAGAAATTTATAGAATAATAAGAGATTATGGTGAAGAGAAGTTTGCAAAGAGAATAGCTAGATTTATAGTCGAAAGAAGAGAGGAAGAGCCAATTAGAACTACCTTGGAACTTGTTGAAATTATAAAAGCGGCTATACCAGCAAGGGCTAGAAGAGAAGGGCCTCATCCAGCTAAAAGAACATTTCAAGCTATAAGAATAGAAGTTAATAGTGAATTATCTATTTTAAACAAAGCCATTGAAGATGGAGTAAATAGGTTAAATAAAGGTGGTAGGATGGCTATTATTACCTTCCACTCTTTAGAAGATAGAATAGTAAAACTTAAATTTAAGGAACTAGCAACTTCTTGTACATGTCCAAAGGAATTTCCAATTTGTGTTTGCGGGGGAAAAGCAAAGGTAAAGGTAATCTCTAGGAAGGCAATTGAACCTTCAGAAGAAGAAGTATTAGAAAACCCAAGAAGTAGAAGTGCAAAATTAAGAGTTATTGAGAAGCTCTAG
PROTEIN sequence
Length: 311
MEFKHVSVLLNECIEGLNIKENGIYVDGTLGGGGHSLEILKNLSSEGLLIGIDQDTDALKAAGVRLQDFSNVKYVHSNFYNIDKVLNDLEIEKIDGMLMDLGVSSYQLDTGDRGFSYMQDAELDMRMNRENDLSAYEVVNDYSEEEIYRIIRDYGEEKFAKRIARFIVERREEEPIRTTLELVEIIKAAIPARARREGPHPAKRTFQAIRIEVNSELSILNKAIEDGVNRLNKGGRMAIITFHSLEDRIVKLKFKELATSCTCPKEFPICVCGGKAKVKVISRKAIEPSEEEVLENPRSRSAKLRVIEKL*