ggKbase home page

NECEvent2014_4_6_scaffold_1200_1

Organism: NECEvent2014_4_6_Clostridum_7_2_43FAA-rel_29_6_partial

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 9 / 38 MC: 3
Location: 24..998

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transport ATP-binding protein AppF n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MUE1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 324.0
  • Bit_score: 497
  • Evalue 8.20e-138
  • rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGK87466.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 323.0
  • Bit_score: 505
  • Evalue 5.50e-140
appF2; oligopeptide transport ATP-binding protein AppF similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 324.0
  • Bit_score: 497
  • Evalue 2.30e-138
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 975
ATGTCTAATGATATATTAATAGAAGTAAAGAATTTAAAAAAGTATTTTCCAGTAAAAAATGAGTTTTTAAGTGGGGAAAAAAAATACGTTAAAGCAGTAGATGGAGTTTCTTTTAATATTAAAAAAGGAGAAACCTTCGGACTTGTAGGTGAATCAGGTTGTGGTAAATCAACTCTTGGAAGATCTATTACAAGGCTTTATGATACAACAGAAGGAGATATAATTTTTGAAGGAACAAATATAGCTAATCTTTCTAAAAAAGAAATGAAAAACTTTTATAGTAAAATTCAAACTATATTTCAAGATCCATATTCATCTTTAAATCCGAATATGACAGTTGGAGAATTAGTAAATGAACCTTTAGCATTGCATACTAAATTAAATAAGGATGAAAGAAATAAAAAAATAAAAGAATTACTAGACATGGTTGGATTATCAGAGGCAGATATGGATAAGTTTCCTTATGAATTTAGTGGAGGACAAAGGCAGAGAATAGGAATTGCAAGAGCCATATCTACTGAACCAGATTTTATTCTTTGTGACGAGCCTATTTCTGCATTGGATGTATCTATTCAAGCTCAAGTGGTGAATATGTTAGAAGATTTGCAGAAAAAATTAAAACTAACATATCTTTTTGTTGCTCATGATTTATCTATGGTAAAGCATATTTCTGATAGAATAGGAGTAATGTATCTTGGAAAAATGGTAGAAATATCAGATAGTAATGAATTATATAAAAAGCCACTTCACCCATATACAAAAGGGCTTTTATCAGCTATACCAATAGCAGATCCTAAGAAAGCAAATAATTCAGAAATAACATTAATAAAGGGAGATGTGCCTAGCCCTATAAATATTCCATCAGGATGTAGATTTCATACTAGATGCCCTTATGCAACAGACATATGTAAGACTGTGGAACCTGAAATGAGAGAGATAGAAAAGAATCACTTTGTAAGCTGTCATTTATATTAA
PROTEIN sequence
Length: 325
MSNDILIEVKNLKKYFPVKNEFLSGEKKYVKAVDGVSFNIKKGETFGLVGESGCGKSTLGRSITRLYDTTEGDIIFEGTNIANLSKKEMKNFYSKIQTIFQDPYSSLNPNMTVGELVNEPLALHTKLNKDERNKKIKELLDMVGLSEADMDKFPYEFSGGQRQRIGIARAISTEPDFILCDEPISALDVSIQAQVVNMLEDLQKKLKLTYLFVAHDLSMVKHISDRIGVMYLGKMVEISDSNELYKKPLHPYTKGLLSAIPIADPKKANNSEITLIKGDVPSPINIPSGCRFHTRCPYATDICKTVEPEMREIEKNHFVSCHLY*