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NECEvent2014_4_6_scaffold_4788_1

Organism: NECEvent2014_4_6_Clostridum_7_2_43FAA-rel_29_6_partial

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 9 / 38 MC: 3
Location: comp(82..1056)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type xylose transport system, periplasmic component n=1 Tax=Clostridium sp. BNL1100 RepID=H2JEE2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 324.0
  • Bit_score: 526
  • Evalue 2.20e-146
  • rbh
xylose ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 324.0
  • Bit_score: 526
  • Evalue 6.10e-147
ABC-type xylose transport system, periplasmic component {ECO:0000313|EMBL:AEY66516.1}; Flags: Precursor;; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 324.0
  • Bit_score: 526
  • Evalue 3.00e-146

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Taxonomy

Clostridium sp. BNL1100 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 975
GTAGCAATGCCTACACAATCACTTCAAAGATGGAATCAAGATGGATCTAATATGAAGTCAGAGCTTGAAGAAAAAGGATATACCGTAGATTTACAATATGCAAATAATGATGTAAATACTCAAGTTCAACAAATAGAAAATATGATAACTAAGGGATGTAATATTTTAGTTGTAGCATCAATTGATGGATCAGCATTAACTGATGTTTTAAGTAAGGCTGCTGATAATAATATTAAGGTTATAGCTTATGATAGATTAATTATGCAATCTGATAATGTAGATTATTATGCAACTTTTGATAACTTTAAGGTTGGTGTTATTCAAGGTCAATATATAGAAGAAAAATTAGATTTAAAAAATGCAGCAGGACCTTTCAATATTGAATTATTTACTGGAGCTCCAGATGATAATAATGCAACATTTTTCTTTAATGGAGCAATGAGTATATTACAACCATATATAGATAATGGTAAGTTAGTTGTTCCAAGTGGACAAACTAAATTTACAGAAGTTGCAACTCAAAGTTGGGACTCTGCAAAAGCACAATCAAGAATGGATAATATAATTACAGCTAATTATGCTAATGGTAATAAATTAGATGCTATTTTATCATCAAATGACAGCGTTGCTATAGGCATAGTTGCTTCTCTTCAAAATGCAGGCTATGGTTCAGCAGATAAACCTTATCCAATTTTAACAGGACAAGACTGTGATAAGGCAAATGTAATAGCAATGGTAAATAAGCAACAATCTATGTCTGTATTTAAAGATACTAGAACACTTGCTAAAAAAGTAGTTGAAATGACAACTGCTCTACTTGAAGGAAAAGAAGCTGAGGTAAATGATACAAAAACATACGATAATGGTGCTAAAGTTGTTCCATCTTTCCTTTGTGATCCAGTAACAGTAACAGTTGATAATTATAAAGCAACTTTAATTGATAGTGGATATTATCAAGAAGCTGACTTAAAGTAA
PROTEIN sequence
Length: 325
VAMPTQSLQRWNQDGSNMKSELEEKGYTVDLQYANNDVNTQVQQIENMITKGCNILVVASIDGSALTDVLSKAADNNIKVIAYDRLIMQSDNVDYYATFDNFKVGVIQGQYIEEKLDLKNAAGPFNIELFTGAPDDNNATFFFNGAMSILQPYIDNGKLVVPSGQTKFTEVATQSWDSAKAQSRMDNIITANYANGNKLDAILSSNDSVAIGIVASLQNAGYGSADKPYPILTGQDCDKANVIAMVNKQQSMSVFKDTRTLAKKVVEMTTALLEGKEAEVNDTKTYDNGAKVVPSFLCDPVTVTVDNYKATLIDSGYYQEADLK*