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NECEvent2014_4_6_scaffold_5041_2

Organism: NECEvent2014_4_6_Clostridum_7_2_43FAA-rel_29_6_partial

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 9 / 38 MC: 3
Location: 597..1016

Top 3 Functional Annotations

Value Algorithm Source
FliA/WhiG family RNA polymerase sigma factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7V0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 140.0
  • Bit_score: 251
  • Evalue 5.80e-64
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 140.0
  • Bit_score: 251
  • Evalue 8.10e-64
fliA; RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 131.0
  • Bit_score: 194
  • Evalue 2.40e-47

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGGAATGTGAAAGCCCTGTAATTCAAAAAGAAAAAATAGTTGAAAAGTACATACCATTAGTTAAATATTTGGCTTCAAGAATAATGCTAGGTAAAACTAAGTACATTGAATATGAAGATTTAGTAAGCTACGGTATTGTTGGGCTTTTAGATGCAATTAATAGATATGATTCATCTAAGGGAATGAAATTTTCATCTTATGCAACATTAAGGATAAAAGGGGCTATGATAGATGAAATAAGAAAAAATAGACCTATATCCAAGGGGGCAATGGACAAATTAGCTAAATATAATGAGTCTGTGGAGAGATTACAAAATATATATATGAGAGAGCCATCTATAAAGGAAATTGCATTAGATTTAAATATTACAGAATCAGAAGTATCACAAGTAGAAAATTATATTAATTATATGTCTATA
PROTEIN sequence
Length: 140
MECESPVIQKEKIVEKYIPLVKYLASRIMLGKTKYIEYEDLVSYGIVGLLDAINRYDSSKGMKFSSYATLRIKGAMIDEIRKNRPISKGAMDKLAKYNESVERLQNIYMREPSIKEIALDLNITESEVSQVENYINYMSI