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NECEvent2014_4_7_scaffold_726_1

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(3..1223)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 407.0
  • Bit_score: 824
  • Evalue 6.80e-236
DNA-directed RNA polymerase subunit beta n=22 Tax=Veillonella RepID=T0T1W8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 394.0
  • Bit_score: 799
  • Evalue 2.20e-228
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 394.0
  • Bit_score: 799
  • Evalue 6.10e-229

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Taxonomy

Veillonella dispar → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1221
ATGGTAGACCAGTGTGTTTTGATAGGGGTGAAAGCAAATATGTTCAAACCTGAACAGGTAGGCAAACGAACTCGTTATACGTACGCTAAAATTAACGAAGTTATCAAGATGCCGCATTTATTGGACATTCAGCGTAAATCGTATGAGTGGTTCTTGGAGAGTGGTTTACAAAATATTTTCAACGATATTTCTCCGATTAAAGACAATTCAGGTAATCTAGTACTTTCTTTTGAAGGCTTCAGCTTAGGTGAACCTAAGTATGATATTAATGAATGTAAAAATCGTGATGCTACTTACGCAGCACCACTTCGTGTAAATATTCGCTTGGTAAATAATGATCCAGAAAATATGGACATTAAAGAACAAGAAGTATTCATGGGCGATTTCCCATTGATGACAGATACAGGTACTTTCATCATCAATGGTGCAGAACGTGTTATCGTATCCCAATTGGTACGTTCTCCAGGCGTTTACTACAATAAAGAAATCGATACAATGGGTAACCGTTTGTATGATTCCACAGTTATTCCTAACCGTGGTGCATGGATTGAACTTGAAACAGATGCTAGTGAAGTGGTAGCTGTTCGTATTGACCGTAACCGTAAATTACCAGCTACTGTATTGGTACGTGCATTAGGTTGGGATACGAATGAAAGTATCCTCGACCTCTTCTGGAATGGTAAAACTGATGAGGATGGTTTACCAGTATATGATGAACGCATCGTTCGCACATTAGAAAAAGATACAACTCAATCTGCTGACGAAGCATTAGTTGAAATCTATAAAAAATTACGTCCAGGTGAGCCTCCTACTGTAGAGTCTGCTCGTAACTTGTTCGATAACTTGTTCTTCGATGCACGCCGTTATGACTTAGCGCGCGTTGGTCGTTATAAATTGAACAAAAAACTTGGCTGGCGCCAACGTATGTTGGGTCAAACATTGGCTCAACCAATTGTAGATCCAGAAACTGGCGAAATTATCCTTGATGCAGGCGTACAAGTTGGGGAAGAACAACTTGATATCGTTGCTAATAGCCATGTTTTCGATGGTGAAGGTTTTGCTGAATTCTATATCGTAAATAATGATGGTGTAGAGTCTAAAGTTATCTGTAATAACTGCAACTTACCATATGATCACCGTACAGTAACACGTGAAGACATGATCGCTAACATTTCTTACTTGCTCAACCTTATGGATGGTGCAGGTCATACAGATGATATT
PROTEIN sequence
Length: 407
MVDQCVLIGVKANMFKPEQVGKRTRYTYAKINEVIKMPHLLDIQRKSYEWFLESGLQNIFNDISPIKDNSGNLVLSFEGFSLGEPKYDINECKNRDATYAAPLRVNIRLVNNDPENMDIKEQEVFMGDFPLMTDTGTFIINGAERVIVSQLVRSPGVYYNKEIDTMGNRLYDSTVIPNRGAWIELETDASEVVAVRIDRNRKLPATVLVRALGWDTNESILDLFWNGKTDEDGLPVYDERIVRTLEKDTTQSADEALVEIYKKLRPGEPPTVESARNLFDNLFFDARRYDLARVGRYKLNKKLGWRQRMLGQTLAQPIVDPETGEIILDAGVQVGEEQLDIVANSHVFDGEGFAEFYIVNNDGVESKVICNNCNLPYDHRTVTREDMIANISYLLNLMDGAGHTDDI