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NECEvent2014_4_7_scaffold_2697_2

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 420..1094

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMT5_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 224.0
  • Bit_score: 439
  • Evalue 2.40e-120
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 224.0
  • Bit_score: 439
  • Evalue 6.80e-121
RNA polymerase sporulation specific sigma-factor SigH {ECO:0000313|EMBL:EQC65694.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 224.0
  • Bit_score: 439
  • Evalue 3.40e-120

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 675
ATGAAAATGATTCATACACGCAAGTCCGATTACAATTTCAAGGAAATGACCGATGAGCAAGTTGTGGTCATAGCTCAGGAAGAGCAAAATGAGTTTGCAATCGATTATATTGTTAATAAATATAAGAACTTTGTAAGAGCTAAGGCTCGCTCCTATTTTTTGGTAGGTGCCGACCGAGAGGATATCATCCAAGAAGGGATGATTGGACTCTATAAGGCGACGCGAGATTTTAAACATGATAAATTAGCGTCTTTTAGAGCCTTTGCGGAACTTTGTATAACTAGACAAATTATTACAGCTATTAAATCGGCTACAAGACAAAAACATGCGCCTTTGAACTCCTATATATCCTTAAATAAACCGGTGTATACAGAGGACTCTGAGCGTACATTGATTGAAATGCTATCTTCAACAAAGATTACAAATCCTGAAGACCTCATTATCAGTCAAGAGGAACTAGATGATATTGAGCGCAATATTGGTCATATTTTAAGTGATCTCGAATGGGAAGTCTTGGAAGGATACCTTGATGGACGTTCCTATCAAGAAATGGCTGAGGTCACAGATCGTAGTGTTAAATCTATTGATAATGCGCTACAAAGGGTAAAACGTAAATTAGAGAAGTATTTAGAACATCGTGTATTGGGCTCGCATCGAGCATCACAGGAAGGATGA
PROTEIN sequence
Length: 225
MKMIHTRKSDYNFKEMTDEQVVVIAQEEQNEFAIDYIVNKYKNFVRAKARSYFLVGADREDIIQEGMIGLYKATRDFKHDKLASFRAFAELCITRQIITAIKSATRQKHAPLNSYISLNKPVYTEDSERTLIEMLSSTKITNPEDLIISQEELDDIERNIGHILSDLEWEVLEGYLDGRSYQEMAEVTDRSVKSIDNALQRVKRKLEKYLEHRVLGSHRASQEG*