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NECEvent2014_4_7_scaffold_2697_4

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 1395..2387

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=686660 species="Bacteria; Firmicutes; Negativi similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 327.0
  • Bit_score: 658
  • Evalue 5.20e-186
Ribonuclease R n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YRH1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 327.0
  • Bit_score: 659
  • Evalue 1.70e-186
ribonuclease R similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 304.0
  • Bit_score: 610
  • Evalue 3.30e-172

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 993
TTGAAGAAGAAGGTATTGGACTTTTATAAATCTATACAACCACATGCATACCATATTGAGGATGCAGCAATGGATAATCGTATTCGAGGTGGCAAAGATCTTGAAATGTTTATTCAATCTGCGAAAATGCTCGCCCGTGAAGGCGTATTAACTTCATCTCGACCAGATGTATACCGATATGAAGATCAACAGCATGAAGAATATGAAGGTATCTACAAAGGATATCGTAAATCTTATGGATTTGTTATTATGCTAAATGATGAAGATATTTATGTAGCAGAACAAAATAAAGGAACTACTATGCATAATGATAAGGTACGTGTTCGTATTGTACCATCAGATTATACAAAGCATAAACGTGAAGGCATCATCGTTGATGTTATTGAGCGTGCTAATGAAACCATAGTTGGTACTTACGACAGACAACAACACTTCGGCTTTGTTGTACCAGATGATGAACGTATTGGAACAGATATTTTTGTAGATTTAAAAGATACTTTAGATGCTCGGAGTGGAGCTAAGGTACTAGTAAAAATTACAAAATGGCCTGAAGGCAATAAAAAACCTGAAGGAATTATAACAGAAATTTTAGGCTATAAGGGGGATGTAGGCCTAGACATTAACTGTATTATGGCTAATCATAAGATTCCTTTTGCATTCCCTAAAGAGGTAATTGAGGCAAGTGAGAAGATAGATACTATTGTTCATGAAGATCCGAAGCGGTGGGATCTTAGAGACTTACAAATGGTAACTATCGATGGAGAAGATGCAAAAGATCTTGACGATGCTGTAAGTGGTCGTAAATTACCAAATGGTAATTATGAGCTAGGCGTACACATTGCGGATGTTAGTCATTATGTTACTTCAGGCCAGCCTATTGATAATGAAGCATACAAGCGGGGGACTTCAGTTTACTTAGTGGACCGCGTAGTACCAATGTTACCAGAGGTATTATCGAATGGTATTTGTAGTTTAAATGCTCTAAGATTTTAA
PROTEIN sequence
Length: 331
LKKKVLDFYKSIQPHAYHIEDAAMDNRIRGGKDLEMFIQSAKMLAREGVLTSSRPDVYRYEDQQHEEYEGIYKGYRKSYGFVIMLNDEDIYVAEQNKGTTMHNDKVRVRIVPSDYTKHKREGIIVDVIERANETIVGTYDRQQHFGFVVPDDERIGTDIFVDLKDTLDARSGAKVLVKITKWPEGNKKPEGIITEILGYKGDVGLDINCIMANHKIPFAFPKEVIEASEKIDTIVHEDPKRWDLRDLQMVTIDGEDAKDLDDAVSGRKLPNGNYELGVHIADVSHYVTSGQPIDNEAYKRGTSVYLVDRVVPMLPEVLSNGICSLNALRF*