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NECEvent2014_4_7_scaffold_21_25

Organism: NECEvent2014_4_7_Clostridium_butyricum_28_16

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 25726..26409

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5E8E2 related cluster n=1 Tax=unknown RepID=UPI0003D5E8E2 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 227.0
  • Bit_score: 436
  • Evalue 1.20e-119
  • rbh
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ETI87426.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 227.0
  • Bit_score: 436
  • Evalue 1.70e-119
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 180.0
  • Bit_score: 250
  • Evalue 3.50e-64

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
ATGATACTCTTTTGCTTTGAAGAAATTTATATAAATTTTAATGAACCAATTGATGAGTTGAAAGCTCTAATATATAGATGCATCGATAAGAAAGGAGCTAGTAGAAATTTGGATGAAAAAGAACTTATTATAAAAATCCAGTCTGGTGATATGAATGCCTTTGCAATTATTTTTGAAAAATATAAAAATGAAGCAGTAAGATATTCATATCTTATTATAGGTAATAAACATACAAGTGAGGATATTGTTCAGGAGGCTTTTGTAACATGTTATACAAAAATAAAATCATTAAAAAAGCAAGAACAATTTAAATCTTGGTTTTTTAAAATACTTACACGAATTGCATGGAAATATTATAAAAAAGAAAAGAAATCAGTACCAGTTGATAATATTTTTGAAAAAGCAGATTATGAAACAAATTGTGAGGCTATAAGTAAGTATATAAAAAAAGAGCAAGCTGATATTCTGCATGAGGTAATTGATGAGCTTGATATAAAACAAAAAATGGTCATAATTCTTTATTATTTTAATGAACTTACAATAAAAGAAATTGCACAAATAATGGAGTGCTTTGAGGGAACTGTTAAATCACGACTTTATACTGCAAGAAAAAAGTTGAAAAAGAGTTTAATGGATTTTGATAAATGTGAGGATATAAGAGAAAAGGAGTATGGAGTTTTATGA
PROTEIN sequence
Length: 228
MILFCFEEIYINFNEPIDELKALIYRCIDKKGASRNLDEKELIIKIQSGDMNAFAIIFEKYKNEAVRYSYLIIGNKHTSEDIVQEAFVTCYTKIKSLKKQEQFKSWFFKILTRIAWKYYKKEKKSVPVDNIFEKADYETNCEAISKYIKKEQADILHEVIDELDIKQKMVIILYYFNELTIKEIAQIMECFEGTVKSRLYTARKKLKKSLMDFDKCEDIREKEYGVL*