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NECEvent2014_4_7_scaffold_1962_1

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 1..357

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 118.0
  • Bit_score: 232
  • Evalue 6.60e-59
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Clostridium perfringens RepID=B1BMR6_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 232
  • Evalue 1.80e-58
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 232
  • Evalue 2.50e-58

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
GTATTATTACACGCAATAATGGATTCACTTTTAGGAGCAGCGGCTTTAGGAGATATAGGAAATCATTTTCCAGATACAGACCCTAAATATAAGGGTGCTGATAGCATAAAACTTCTAGAATTTGTAGGTGAACTTTTAAATAAAAATAACTACAAAATATCAAATATAGATGCAACTATAATAGCTCAAAGACCAAAAATGGCTCCTCATATACCTACTATGAGAGAAAATATAGCTAAAGCATTAAATATAGACTTAGATCAAATAAATGTTAAAGCAACTACTGAGGAAGGACTTGGTTTTACTGGTTCTGGAGAAGGAATCTCATCTCAAAGTATTTGTCTTTTAATAAAATAA
PROTEIN sequence
Length: 119
VLLHAIMDSLLGAAALGDIGNHFPDTDPKYKGADSIKLLEFVGELLNKNNYKISNIDATIIAQRPKMAPHIPTMRENIAKALNIDLDQINVKATTEEGLGFTGSGEGISSQSICLLIK*