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NECEvent2014_4_7_scaffold_2100_2

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 1218..1661

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 147.0
  • Bit_score: 293
  • Evalue 2.00e-76
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 147.0
  • Bit_score: 290
  • Evalue 3.30e-76
Peptide deformylase n=1 Tax=Clostridium perfringens F262 RepID=H7CXD9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 147.0
  • Bit_score: 294
  • Evalue 6.30e-77

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 444
TTGGCAATAAGAAACTTAAGATTTAATGACGACGAAATATTAAGAAAAAAATGTAGAGTAGTTGATGACATTAATGATAGAATAAAAATCTTAGTAGAAGATATGATAGAAACTATGTATGAAAATAATGGAGTTGGATTAGCAGCTCCACAAGTTGGAATACTAAAGAGGATCTTTGTTGTTGATGCTATGGATGAAGCAGGTTCTAGAGTATTCATAAATCCAGAAATATTAGAAAAAAGTGGAGAGCAAACTGATGAAGAAGGATGCTTAAGCTTACCAGGTAGACATAAACCAGTAAAGAGAGCTAATAAAATAAAGATAAAGGCTTTAGATGTTAATGGAAATGAGTTTGTATTAGATGCAGAAGAATTTTTAGCAAGAGCTATACAACATGAATATGATCATTTAGAGGGAGTACTTTTTATAGATCATGAGCTTTAA
PROTEIN sequence
Length: 148
LAIRNLRFNDDEILRKKCRVVDDINDRIKILVEDMIETMYENNGVGLAAPQVGILKRIFVVDAMDEAGSRVFINPEILEKSGEQTDEEGCLSLPGRHKPVKRANKIKIKALDVNGNEFVLDAEEFLARAIQHEYDHLEGVLFIDHEL*