ggKbase home page

NECEvent2014_4_7_scaffold_2111_1

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(2..1375)

Top 3 Functional Annotations

Value Algorithm Source
Spore germination protein AF n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGZ3_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 458.0
  • Bit_score: 881
  • Evalue 3.70e-253
  • rbh
spoVAF; stage V sporulation protein AF similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 458.0
  • Bit_score: 880
  • Evalue 2.40e-253
Spore germination protein AF {ECO:0000313|EMBL:EDT26741.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 458.0
  • Bit_score: 880
  • Evalue 1.20e-252

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1374
TTGGACTTAACATCAAATTTTGATAAAAATATAAATACTTTATCTAAAGCTTTAAGGGTTGGAAAAAGTTTTGATATAATTGAACGTTCAATAATAATTGGGGATAAAAAAGCCACAATGTATTATATTGATGGATTTGTAAAAGATGACGTAATGGAATTAATCATGAGTGACTTCTTTTCCTTAAGCAAAACTGAAATGAACTTAATAAAATCACCTAAGGATTTTATGAGAAGACAAATCCCTTATGTAGAAGTAGCTGAAGAAGTATCCATATATAAAATAGTATCTCAAGTTCTCTGTGGACAGACAGCATTAATTTTAGAAGGATTCTCCAGTGCAATAATGATAGATTTAAGAACCTATCCAGTTAGAGGGCCTCAAGAACCAGAAACTGAAAAAGTATTAAGGGGTTCTAGGGATGGTTTTGTAGAGACCATTGTATTTAATACTGCATTAATTAGAAGAAGAATAAGAGATCCTAGACTTACCTTTGAAATGATGTCTATAGGAAATGTATCAAAAACAGATGTGGTTATATCATTTTTAGACGAGGTAGTTGATAAAAAAACTCTTAATCTAATAAAAAAGAAATTTGAAAATTTAGATATACAAGCATTAACCATGAGCGAACAAAGCCTTGTTGAATCTCTTTCAAATGCCTCATGGTATAATCCATTCCCTAAGGTTAGATATACAGAAAGGCCTGATGTTGCAGCTGCCCATATAACAGAGGGAAAGATAGTTGTTATTATAGATAACTCTCCTTCAGTTATAATTTTACCAACTACTATATTTGATTTTATACAGGATGTTGATGATTATTATCTTCCTGTAATAACAGGTAATTTTATTCGTTTAATAAGAAATTTCATACTAATTTCTACCATTTTTATAACACCACTTTATTTGCTTTTAATCCAAAATGACTATAGAATACCTGATTACTTAAAATTTTTATTACCTGTTGATGGATATAAAGTTCCATTGATAGTTCAATTTTTACTTCTTGAAGTTGCAGTAGATGGATTAAAACTTGCCTCTTTAAATACGCCAAATGCCCTTGGTATGTCCTTATCTGTTATTGGAGGATTAATACTTGGTCAATTTGCTGTAGATACTGGGTGGTTTTTACCACAAACCATATTATATATGGCCATAGTTACGCTAGGAAGCTTTTCTCAACCTAGTTTAGAACTTAGCTATGCCTTAAAATTTTGGAGAACTCTCCTACTCATATTAACAAGCCTATTTAATGTAATAGGATTTTTTGTAGGATTAATAATAGGAATAGTTTTAATTGCAAGTAATAAAACTTTAACTGGTGATTCCTATCTTTATCCCCTTATTCCCCTTGACTGGAAAGCACTTAAA
PROTEIN sequence
Length: 458
LDLTSNFDKNINTLSKALRVGKSFDIIERSIIIGDKKATMYYIDGFVKDDVMELIMSDFFSLSKTEMNLIKSPKDFMRRQIPYVEVAEEVSIYKIVSQVLCGQTALILEGFSSAIMIDLRTYPVRGPQEPETEKVLRGSRDGFVETIVFNTALIRRRIRDPRLTFEMMSIGNVSKTDVVISFLDEVVDKKTLNLIKKKFENLDIQALTMSEQSLVESLSNASWYNPFPKVRYTERPDVAAAHITEGKIVVIIDNSPSVIILPTTIFDFIQDVDDYYLPVITGNFIRLIRNFILISTIFITPLYLLLIQNDYRIPDYLKFLLPVDGYKVPLIVQFLLLEVAVDGLKLASLNTPNALGMSLSVIGGLILGQFAVDTGWFLPQTILYMAIVTLGSFSQPSLELSYALKFWRTLLLILTSLFNVIGFFVGLIIGIVLIASNKTLTGDSYLYPLIPLDWKALK