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NECEvent2014_4_7_scaffold_3855_1

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(3..824)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=2 Tax=Lachnospiraceae RepID=C9LAP3_BLAHA similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 279.0
  • Bit_score: 178
  • Evalue 1.20e-41
Uncharacterized protein {ECO:0000313|EMBL:EGG80047.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 279.0
  • Bit_score: 178
  • Evalue 1.70e-41
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 283.0
  • Bit_score: 165
  • Evalue 3.00e-38

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Taxonomy

Lachnospiraceae bacterium 6_1_63FAA → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 822
ATGGAAATAAGAAATATTGAAAGTTTTTTGAGTATTGTTCAGCATAAAACTTTTACAAAAGCAGCTGAAGAATTAGGATATGCTCAGTCAACAATAACAATGCAAATACAGCAGTTGGAAGAAGAACTAAATGCTAAGTTGTTTGATAGAATTGGTCGTTCTGTATATCTAACTGATTTTGGTGAAAATTTCCTTGTTTTAGCAAGAGAGATGTATAATTTATCACTTGAAATGAAATATCTAAATAGTGAGCCAACAATGATTCATGGTACGCTAAGAATTGGCACAATAGAATCCTTCCTTCTATCTAAAATGGATGAAGTATTGATAAAATTTGCTGAAAATTATCCAAATATAACATTAGATATTAGAACAGGGAGCACTATGGAGCTATATGATGAATTGTCTAAGAATAATTTCGATATTGTATTTGGAATAGAAAATGAGATTTCTCAAAATAAATTCGAAAAAATAAAATTTAAAACAATAGAAATGTCATTTATGACAAGATATTCTAAAAATCTAAAAAAAATGACTTTAAAAGAAATGGAAGATAAACTTTTTGTTTTGACAGACAATGAAAGTTATTATAATCAAAAACTGATGCAAATATTTAATGAAAAAAATTTAAAAATAAAAAAATTTATTCATATTCAAAATATTAGTGCGATTTTGAATATAATAAAAGAAAACGATGTTATATCTTTTCTTCCAACTTATGTAGCTACTAGTTATATTAAAAATAAAGAAATTTCCATAATAGATACAGATTTAGAACGACTAACTGTTAAAGTTAATGGATATATAAATAAAGAAAAGTGG
PROTEIN sequence
Length: 274
MEIRNIESFLSIVQHKTFTKAAEELGYAQSTITMQIQQLEEELNAKLFDRIGRSVYLTDFGENFLVLAREMYNLSLEMKYLNSEPTMIHGTLRIGTIESFLLSKMDEVLIKFAENYPNITLDIRTGSTMELYDELSKNNFDIVFGIENEISQNKFEKIKFKTIEMSFMTRYSKNLKKMTLKEMEDKLFVLTDNESYYNQKLMQIFNEKNLKIKKFIHIQNISAILNIIKENDVISFLPTYVATSYIKNKEISIIDTDLERLTVKVNGYINKEKW