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NECEvent2014_4_7_scaffold_3359_2

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(808..1830)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator, AraC family n=8 Tax=Clostridium perfringens RepID=Q0TNM3_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 340.0
  • Bit_score: 676
  • Evalue 1.80e-191
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 340.0
  • Bit_score: 676
  • Evalue 5.00e-192
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT15254.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 340.0
  • Bit_score: 676
  • Evalue 2.50e-191

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1023
AGATATTCTCTATGTATTATAAACACTAGAAGTAGATATGATAGTGAGGAAATGTTACATAATATAGTTAATGTAATAAAGGAAAATACTCAAAATAACTTTGAGATAATATACACCTTAGATGAGGAGCTTATTTTAATAAATTCTTGGGATGAAGACTTAAGTAAAAAAGAGATTAAAAAATATTATGATAAGTTAAAAGAACAAATAATAAATGAATATGGAATAGATGTATTTTTAAGTGTTGGAGAACCTGTTTGTGATCTTTATAAAATTAGTTCAAGTTATAAGGAAGCAAATAACTTAAAAAAATATGTTCTTACCTTAGGATATAATAAGTGTATAACAACAGAGGATGTTAAGGATATAAATGAGAAGAATATAAACTTTAGTGAGGTTTTAGATAAATTAAATAAAAGAATAATTGCTAAAGATATAGAAGGGGCAGAAAAAATCATTGAGGAAACTGTTGAGGATAAAAAGTTAAATCCAAGAAATATATATGATTTATCTGTAAAAATACTATTTTTATTGGATGGTATAGTTGAAGAATTTAAAGTTGAAAAACAATACACAGGAAATAGTTTAGGAGAGGAAATAGTTGCTCTTTGTAGTGAAGATACAAGGGAAGATATTAAAACCTTATTATGCAGTGAAATTAGGGAGGTTATAGAACTTATGCACCCAACAACTATAAAATATAGCCCTGTAATTCAACAAATAATAAGTTATGTAAATGAAAACTATTATGAAGAGGTAAGCCTTAAGACCTTAGCTCAAAAATATCATATAAATACTTCTTATTTAGGTCAAGTATTTACTAAAGAAGTTGGATGTTCATTTTCTGAGTATTTAAATAAAACTAAAAATATGAAAGCTAAAGAGCTTATATTAAATACAAATATGAAGATAAATGATATAGCTAAAAAAGTAGGATATTTAGATACTAGTTATTTCTATAGAAAGTTTAAAAAGTACTATGGAGTTTGTCCATCAACCTTAAGAAATATAAAAAATTACTAA
PROTEIN sequence
Length: 341
RYSLCIINTRSRYDSEEMLHNIVNVIKENTQNNFEIIYTLDEELILINSWDEDLSKKEIKKYYDKLKEQIINEYGIDVFLSVGEPVCDLYKISSSYKEANNLKKYVLTLGYNKCITTEDVKDINEKNINFSEVLDKLNKRIIAKDIEGAEKIIEETVEDKKLNPRNIYDLSVKILFLLDGIVEEFKVEKQYTGNSLGEEIVALCSEDTREDIKTLLCSEIREVIELMHPTTIKYSPVIQQIISYVNENYYEEVSLKTLAQKYHINTSYLGQVFTKEVGCSFSEYLNKTKNMKAKELILNTNMKINDIAKKVGYLDTSYFYRKFKKYYGVCPSTLRNIKNY*