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NECEvent2014_4_7_scaffold_3538_2

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(895..1575)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFI7_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 445
  • Evalue 4.40e-122
  • rbh
DNA-binding response regulator {ECO:0000313|EMBL:EDT27352.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 445
  • Evalue 6.20e-122
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 226.0
  • Bit_score: 442
  • Evalue 8.10e-122

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGGAAAGCAAAAAGATTTTTATTATAGAAGATGAAGAAAAGATAAGAGAAGAGCTTACTAAATTTTTAGAGAAGTATGGCTACTTTGTAGAGTCATCAGATGATTTTGAAAATATAGTTGATACCTCATTAAGTTGTAATCCTAATATGATTTTACTAGATATAAATCTCCCTTATTATGATGGTTACTATATTTGCAGGGAGATAAGGAAGAAAAGCCAAGTTCCAATTATAGTTGTAACTAGTAGACAAAGTGAGATGGATGAGCTTATGAGTATGAATTTAGGGGCTGATGACTTTGTTACTAAGCCTTATAATACACAAATACTTTTAGCTAGAATTGCATCAATTATGAAAAGAACCTATTCAGGGATTGAGGGGGAAACAGAAATATTTAATTGTAGAGGATTAAAATACAATATGTCTACTAGTGAGGTTTCATTTAAGGATGAAGTAGAGGAGCTTACTAAAAATGAAAGTAAGATTTTAAATATTCTAATAAGAAATAAAGGGAAAATAGTATCAAGGGATAATATTATAAAGGCTTTATGGCAAAGTAATGAGTTTATAGATGATAATACTTTAACTGTTAATGTAAATAGACTTAGAAGAAAGATTGAAGGAATAGGAGCAGAGGGATATTTACAAACTAAGAGGGGGCAAGGGTATATATTATCATGA
PROTEIN sequence
Length: 227
MESKKIFIIEDEEKIREELTKFLEKYGYFVESSDDFENIVDTSLSCNPNMILLDINLPYYDGYYICREIRKKSQVPIIVVTSRQSEMDELMSMNLGADDFVTKPYNTQILLARIASIMKRTYSGIEGETEIFNCRGLKYNMSTSEVSFKDEVEELTKNESKILNILIRNKGKIVSRDNIIKALWQSNEFIDDNTLTVNVNRLRRKIEGIGAEGYLQTKRGQGYILS*