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NECEvent2014_4_7_scaffold_2671_3

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 1588..2397

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=Q8XJJ5_CLOPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 525
  • Evalue 3.10e-146
  • rbh
sigG; sporulation sigma factor SigG similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 525
  • Evalue 8.70e-147
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 525
  • Evalue 4.30e-146

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 810
ATGCGGAAGGGAATTACTTCGAAGGGGTTGATTTCAATTATGATGATAAATAAAGTAGAAATATGTGGAGTCAATACAGCTAAATTACCAGTTTTAAAAGAAAAAGAAATGAAAGAATTATTGCTACAAATGCAAAATGGAGATACAAGTGCTAGAGAGAAATTTATTAAGGGGAATCTGAGATTAGTGCTTAGTGTAATCCAAAGGTTTAATAATAGAGGCGAAAATGTAGATGATTTATTTCAAGTTGGTTGTATAGGACTTATGAAATCTATAGATAACTTTGATTTATCACAAAATGTTAAATTTTCAACTTATGCTGTGCCAATGATAATAGGAGAAATAAGAAGATATTTAAGGGATAATAACACTATAAGAGTAAGTAGATCTTTAAGAGATATAGCTTATAAGGCTTTACTTGTAAGAGATAAGCTAGTAAATGAAAATAATAAGGAACCTACTGTATCTCAAATAGCAAAAGAGCTTAAAATTCCAAGGGAAGATGTTGTTTTTGCCCTAGATGCAATTCAAGATCCAGTTTCTTTATTTGAGCCTATTTATCATGATGGTGGAGATGCAATATATGTAATGGATCAGATAAGTGATTCAAAAAATCAAGATGATAGTTGGCTTGAAAATATAGCAATAAAGGAAGCTATGAAGAAATTAAACGATAGAGAAAAACTTATATTGAATTTAAGATTCTTTAATGGAAGAACTCAAATGGAGGTAGCTGATGAAATTGGTATATCTCAAGCACAAGTTTCAAGGTTGGAAAAAATAGCATTAAAGCATATGAGGAAGTATGTA
PROTEIN sequence
Length: 270
MRKGITSKGLISIMMINKVEICGVNTAKLPVLKEKEMKELLLQMQNGDTSAREKFIKGNLRLVLSVIQRFNNRGENVDDLFQVGCIGLMKSIDNFDLSQNVKFSTYAVPMIIGEIRRYLRDNNTIRVSRSLRDIAYKALLVRDKLVNENNKEPTVSQIAKELKIPREDVVFALDAIQDPVSLFEPIYHDGGDAIYVMDQISDSKNQDDSWLENIAIKEAMKKLNDREKLILNLRFFNGRTQMEVADEIGISQAQVSRLEKIALKHMRKYV