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NECEvent2014_4_7_Peptoniphilus_harei-rel_34_5

NECEvent2014_4_7_Peptoniphilus_harei_34_5
In projects: NECEvent2014_4_7

Consensus taxonomy: Peptoniphilus harei  →  Peptoniphilus  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 451-500 of 512 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_7_scaffold_1090 174_007_scaffold_1090
Species: Peptoniphilus harei (100%)
7 5888 bp 36.31 6.06 100.17
NECEvent2014_4_7_scaffold_3205 174_007_scaffold_3205
Species: Peptoniphilus harei (100%)
3 1931 bp 32.47 6.06 91.04
NECEvent2014_4_7_scaffold_1818 174_007_scaffold_1818
Species: Peptoniphilus harei (100%)
2 3628 bp 39.03 6.08 98.40
NECEvent2014_4_7_scaffold_5272 174_007_scaffold_5272
Species: Peptoniphilus harei (100%)
2 1058 bp 35.54 6.10 100.10
NECEvent2014_4_7_scaffold_4780 174_007_scaffold_4780
Species: Peptoniphilus harei (100%)
1 1204 bp 31.64 6.10 92.94
NECEvent2014_4_7_scaffold_1222 174_007_scaffold_1222
Species: Peptoniphilus harei (83.33%)
6 5314 bp 36.23 6.10 89.71
NECEvent2014_4_7_scaffold_2720 174_007_scaffold_2720
Species: Peptoniphilus harei (100%)
4 2354 bp 36.28 6.12 99.79
NECEvent2014_4_7_scaffold_3797 174_007_scaffold_3797
Species: Peptoniphilus harei (100%)
3 1592 bp 32.22 6.12 100.63
NECEvent2014_4_7_scaffold_4286 174_007_scaffold_4286
Species: Propionibacterium propionicum (100%)
1 1371 bp 30.49 6.13 53.61
NECEvent2014_4_7_scaffold_4186 174_007_scaffold_4186
Species: Peptoniphilus harei (100%)
2 1418 bp 35.05 6.14 69.82
NECEvent2014_4_7_scaffold_5423 174_007_scaffold_5423
Species: Peptoniphilus duerdenii (100%)
1 1022 bp 32.00 6.16 84.25
NECEvent2014_4_7_scaffold_1664 174_007_scaffold_1664
Species: Peptoniphilus sp. oral taxon 386 (75%)
4 3943 bp 34.29 6.16 91.91
NECEvent2014_4_7_scaffold_3414 174_007_scaffold_3414
Species: Peptoniphilus harei (100%)
2 1797 bp 41.57 6.18 91.65
NECEvent2014_4_7_scaffold_5070 174_007_scaffold_5070
Species: Peptoniphilus harei (100%)
1 1116 bp 32.80 6.18 85.48
NECEvent2014_4_7_scaffold_3836 174_007_scaffold_3836
Species: Peptoniphilus harei (100%)
2 1572 bp 38.80 6.20 99.24
NECEvent2014_4_7_scaffold_4172 174_007_scaffold_4172
Order: Clostridiales (66.67%)
3 1425 bp 32.49 6.21 92.84
NECEvent2014_4_7_scaffold_2525 174_007_scaffold_2525
Species: Peptoniphilus harei (66.67%)
3 2561 bp 35.69 6.21 86.22
NECEvent2014_4_7_scaffold_3354 174_007_scaffold_3354
Species: Peptoniphilus harei (100%)
4 1835 bp 31.66 6.21 88.28
NECEvent2014_4_7_scaffold_1091 174_007_scaffold_1091
Species: Peptoniphilus harei (100%)
13 5888 bp 36.04 6.22 93.50
NECEvent2014_4_7_scaffold_4341 174_007_scaffold_4341
Species: Peptoniphilus harei (100%)
1 1350 bp 37.19 6.22 99.78
NECEvent2014_4_7_scaffold_3657 174_007_scaffold_3657
Species: Peptoniphilus harei (100%)
1 1660 bp 36.87 6.23 92.17
NECEvent2014_4_7_scaffold_4938 174_007_scaffold_4938
Species: Peptoniphilus harei (100%)
1 1154 bp 32.06 6.24 99.83
NECEvent2014_4_7_scaffold_4793 174_007_scaffold_4793
Species: Peptoniphilus harei (50%)
2 1201 bp 36.89 6.24 99.17
NECEvent2014_4_7_scaffold_5295 174_007_scaffold_5295
Species: Peptoniphilus harei (100%)
2 1052 bp 34.60 6.27 99.24
NECEvent2014_4_7_scaffold_2947 174_007_scaffold_2947
Species: Peptoniphilus harei (100%)
3 2126 bp 33.91 6.28 68.16
NECEvent2014_4_7_scaffold_3753 174_007_scaffold_3753
Species: Peptoniphilus harei (100%)
2 1616 bp 34.53 6.31 99.88
NECEvent2014_4_7_scaffold_2559 174_007_scaffold_2559
Species: Peptoniphilus harei (100%)
2 2516 bp 34.14 6.32 99.56
NECEvent2014_4_7_scaffold_4188 174_007_scaffold_4188
Species: Peptoniphilus harei (100%)
2 1417 bp 33.31 6.35 100.99
NECEvent2014_4_7_scaffold_1350 174_007_scaffold_1350
Species: Peptoniphilus harei (100%)
5 4834 bp 32.85 6.36 99.86
NECEvent2014_4_7_scaffold_2516 174_007_scaffold_2516
Species: Peptoniphilus harei (100%)
2 2572 bp 36.16 6.36 99.61
NECEvent2014_4_7_scaffold_1173 174_007_scaffold_1173
Species: Peptoniphilus harei (50%)
4 5552 bp 33.18 6.43 82.78
NECEvent2014_4_7_scaffold_2763 174_007_scaffold_2763
Species: Peptoniphilus harei (100%)
3 2310 bp 38.83 6.43 90.78
NECEvent2014_4_7_scaffold_3738 174_007_scaffold_3738
Species: Peptoniphilus harei (100%)
2 1625 bp 37.91 6.46 98.95
NECEvent2014_4_7_scaffold_2299 174_007_scaffold_2299
Species: Peptoniphilus harei (100%)
3 2843 bp 33.94 6.54 81.04
NECEvent2014_4_7_scaffold_3327 174_007_scaffold_3327
Species: Peptoniphilus harei (100%)
2 1850 bp 33.78 6.57 92.27
NECEvent2014_4_7_scaffold_1816 174_007_scaffold_1816
Species: Peptoniphilus harei (100%)
2 3630 bp 38.10 6.61 98.68
NECEvent2014_4_7_scaffold_3297 174_007_scaffold_3297
Species: Peptoniphilus harei (66.67%)
3 1868 bp 35.28 6.66 92.88
NECEvent2014_4_7_scaffold_3268 174_007_scaffold_3268
Species: Finegoldia magna (100%)
2 1884 bp 25.16 6.69 58.92
NECEvent2014_4_7_scaffold_1715 174_007_scaffold_1715
Species: Peptoniphilus harei (100%)
5 3834 bp 37.14 6.73 94.84
NECEvent2014_4_7_scaffold_4792 174_007_scaffold_4792
Species: Peptoniphilus harei (100%)
1 1201 bp 34.80 6.74 99.92
NECEvent2014_4_7_scaffold_1868 174_007_scaffold_1868
Species: Anaerococcus hydrogenalis (100%)
1 3548 bp 35.79 6.76 98.25
NECEvent2014_4_7_scaffold_3132 174_007_scaffold_3132
Species: Peptoniphilus harei (100%)
2 1989 bp 32.43 6.79 99.55
NECEvent2014_4_7_scaffold_1670 174_007_scaffold_1670
Species: Peptoniphilus harei (100%)
4 3935 bp 36.06 6.79 99.11
NECEvent2014_4_7_scaffold_4749 174_007_scaffold_4749
Species: Peptoniphilus harei (100%)
2 1212 bp 35.89 6.81 100.00
NECEvent2014_4_7_scaffold_1617 174_007_scaffold_1617
Order: Clostridiales (66.67%)
6 4046 bp 33.00 6.82 89.94
NECEvent2014_4_7_scaffold_4014 174_007_scaffold_4014
Species: Peptoniphilus harei (100%)
2 1485 bp 34.07 6.87 100.61
NECEvent2014_4_7_scaffold_5168 174_007_scaffold_5168
Species: Peptoniphilus harei (100%)
2 1089 bp 35.08 6.89 91.46
NECEvent2014_4_7_scaffold_3948 174_007_scaffold_3948
Species: Peptoniphilus sp. JC140 (50%)
2 1515 bp 35.38 6.93 90.69
NECEvent2014_4_7_scaffold_3922 174_007_scaffold_3922
Species: Peptoniphilus harei (100%)
3 1528 bp 36.91 6.97 99.15
NECEvent2014_4_7_scaffold_571 174_007_scaffold_571
Genus: Peptoniphilus (50%)
14 12299 bp 37.91 7.04 91.15
Displaying items 451-500 of 512 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.