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NECEvent2014_4_7_scaffold_4979_2

Organism: NECEvent2014_4_7_Propionimicrobium_53_4_v_partial

partial RP 0 / 55 BSCG 1 / 51 ASCG 0 / 38
Location: 241..1140

Top 3 Functional Annotations

Value Algorithm Source
tRNA/rRNA cytosine-C5-methylase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 306.0
  • Bit_score: 290
  • Evalue 5.20e-76
UPI0003A04BEE related cluster n=1 Tax=unknown RepID=UPI0003A04BEE similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 300.0
  • Bit_score: 591
  • Evalue 5.00e-166
  • rbh
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:EPD32843.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 287.0
  • Bit_score: 565
  • Evalue 4.20e-158

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Taxonomy

Propionimicrobium lymphophilum → Propionimicrobium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGTCAGGCTCGTATAGATCTCGACACCGTCGGATAGATTTGCCTCGGCGTGTCGCCTACGAGGTTCTCGAGGAGATTAACGCAGACGGTGCTTACGCAAACCTGGCCTTAAACAAAAGGCTTTCGAGCAGTGGGCTAAGCGGCAAGGATGCGGCGTTCGTCACCGAGTTGGTGGCTGGCACTTGTCGTATGCAAGGCACGTACGACGAGATAATCGAGTTCGTAAGCGGTAGAGATCTTTACGATCTGCAGCCCGAAGTGGTCGATATCCTTCGCCTAGCTTGTCACCAGGCGTTCAAGATGCGCACGCCATCGCACGCTACAGTCGCAACTTCCGTCGACCTAGCAGGCATCGTTGTTGGTGAGCGAGTTACTGGCTTAGTCAACGCAATTGTTCGTAAGCTTTGTCGAGTCTCCTTTGCTGAGGTCGTAGCAGAAATATCCCAGGACTTTGATGATCTTGATTCGCTAGGCTTCAAACACGCTCATCCAAGATGGATTGTAGATTCGCTACTTTCGGCATTGGGCGAAGAGCCAGACCTTGAGGAGCTAGAGAATTGGCTTGAGGCCGATAACGAGCCAACTATTCCCATGCTTGTAGCTAGGCCAGGTTTGTGCGAAAGAGAAGATCTTTCTGGCGCCAGCCCCGCTAGGTATTCTCCTTGGGCGGCAAGCAGACCGGGTAACCCTAGCGAGCTTTCTCTCGTAAGAAGCGGCAAGGCTGCGGTGCAAGACGAAGGTAGTCAATTAGTTGTTCTTGCCGCCTCCCGAGCAGCTAACGCTTCGGGCGTCTGGCTAGATATGTGCTCAGGACCAGGTGGTAAATCCGCCTTGCTTAGGGGCTTGGCGCCTAAAACGCTGGTTTCAGCAGAATTACACGAGCATCGCGCTGGCCTAGTT
PROTEIN sequence
Length: 300
MSGSYRSRHRRIDLPRRVAYEVLEEINADGAYANLALNKRLSSSGLSGKDAAFVTELVAGTCRMQGTYDEIIEFVSGRDLYDLQPEVVDILRLACHQAFKMRTPSHATVATSVDLAGIVVGERVTGLVNAIVRKLCRVSFAEVVAEISQDFDDLDSLGFKHAHPRWIVDSLLSALGEEPDLEELENWLEADNEPTIPMLVARPGLCEREDLSGASPARYSPWAASRPGNPSELSLVRSGKAAVQDEGSQLVVLAASRAANASGVWLDMCSGPGGKSALLRGLAPKTLVSAELHEHRAGLV