ggKbase home page

NECEvent2014_4_7_scaffold_542_8

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA_28_22

near complete RP 48 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 16 / 38 MC: 3
Location: 6770..7711

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 313.0
  • Bit_score: 434
  • Evalue 1.50e-118
ribonuclease Z (EC:3.1.26.11) similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 316.0
  • Bit_score: 393
  • Evalue 7.80e-107
Ribonuclease Z n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFR2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 313.0
  • Bit_score: 434
  • Evalue 1.10e-118
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 942
ATGATAGATTTAACTTTACTTGGATGTGGTGGAGGAATGCCTATGCCAAATAGACATCTAGCTTCTTTGTTTGTTAATATAAATGGAAGAAAAATATTGATAGATGTAGGTGAAGGAACTCAAGTCTCGATAAGGAAAAATAATTTAGGTTTTAAGGCAATAGATATAATTTTAATTACTCATGTTCATGGAGATCATATTGTTGGATTGCCAGGACTTCTTTCTACCATTGGAAATAGTGGGAGAGAAGAGAAGTTAATAATAGTTGGACCAGAAGGGATTACTAATGTAATAAAAGGGTTAAGTGTATTATTTCTATATTTACCATATAAGTTAGAGGTTATAGAAAATCCAAGGGAATTATCTTTTGCTATTAAGAAGAATTTTATAGAGCTATCAGAAAATGATAGAGCTGATCTTATAATTAATACAGAAGAGCTTAATCATTCATCACCTTGTATTGGATATAGTTTATACCTTAAAAGAAAAAGAAAATTTAACTTAGAAAAAGCAGTAGAAAAGAATGTTCCTAGAGTTTTATGGAGTAAGCTACAAAAAGAAGAGATAGTAGAGCATAATGGAGTAGTATATGATAGTTCTATGGTTCTAGGTGATGAAAGAAGAGGAATTAAGTTAAGTTATATAACAGATACGAGACCAACTGATAAAATTATAGATTTGATAGAATATAGTGATTTATTTATATGTGAAGGAACTTATGGAAGTGATGAGGATATAGATAAGGCTATTAAGAATAAGCATATGACTTTTAGAGAAGCTGGGATTCTAGCAAAGGATAGTAATTCAAAGGAATTATTACTTACACATTTTAGTCCAGCCATGAATGAACCTATAGATTTTATTGATAATGCTAAAGAAGTTTTTAATAACACTATTATAGGTGAAGATGGCATGAAGAAAGCCTTAAAGTTTGAAGATTAA
PROTEIN sequence
Length: 314
MIDLTLLGCGGGMPMPNRHLASLFVNINGRKILIDVGEGTQVSIRKNNLGFKAIDIILITHVHGDHIVGLPGLLSTIGNSGREEKLIIVGPEGITNVIKGLSVLFLYLPYKLEVIENPRELSFAIKKNFIELSENDRADLIINTEELNHSSPCIGYSLYLKRKRKFNLEKAVEKNVPRVLWSKLQKEEIVEHNGVVYDSSMVLGDERRGIKLSYITDTRPTDKIIDLIEYSDLFICEGTYGSDEDIDKAIKNKHMTFREAGILAKDSNSKELLLTHFSPAMNEPIDFIDNAKEVFNNTIIGEDGMKKALKFED*