ggKbase home page

NECEvent2014_4_7_scaffold_550_13

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA_28_22

near complete RP 48 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 16 / 38 MC: 3
Location: 11141..12244

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-selenouridine synthase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T9U2_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 368.0
  • Bit_score: 576
  • Evalue 1.60e-161
  • rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS24038.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 368.0
  • Bit_score: 578
  • Evalue 7.60e-162
tRNA 2-selenouridine synthase similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 367.0
  • Bit_score: 383
  • Evalue 9.40e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1104
ATGAAGAAATTATCAGTAACAAATGATTTTAAGAGTATAGTGCTAAATGACACAAAGCTAATAGATGTTAGAGCTCCAATTGAATTTGAAAAAGGAGCAATGATAAATGCAGTAAACATGCCAATTTTGAATAATGAGGAAAGGCATATTATAGGTATATGTTATAAGGAAAAAGGTAACGAAGAAGCAACAAAACTTGGTTATGAAATAGTGTCAGGAGAAATTAAAGAGGCTAGGGTAAAGGCATGGACAGAATTTACAAATGAAAATCCAAATTCTATGATTTATTGCTTTAGGGGAGGATCACGTTCAACTATAGCACAACAATGGATATATGAAGAAACGGGAAAAGATATAGTGAAATTAGATGGAGGATATAAGGCTTTTCGTAATTACCTTATAAATTCATTAGATCCAAAAGAGATAAAATCAAAACCGCTAATATTATCTGGATATACAGGTTCAGGGAAAACAATATTATTGCATAAAATAAATAATTCAATAGATTTAGAAGGCCTAGCTCACCATAGAGGATCTACCTTTGGTCATCATATTACACCTCAGCCAACACAAATTAACTTTGAAAATAATTTAGCTTATAGCTTAATTAAACATAAAAATAATAACTATAAATATATGGTTCTAGAAGATGAGGGGAAAAATATAGGAAAGAGTTTTATTCCAAAGTTATTTTTTGAATATATGAAAAGTGGAGATGTGATATTTTTAGAAGCTTCACTTAATGAAAGAATAGATAATATATTAGAAGAATATGTGATAAATGGACAAGAAGAGCATAGAGAAGTATTTAAAAATGAAGAACTTGCTTTAGAAGCTTGGTTAAATGATATGATAGCAAGTATGGAAAGAGTTAAGGGGAAGCTTGGTGACAGAATACATACAATAGTTAATGAACTTAAACTGGCATACAATGAACAGTTAACAACTAATAAGATAGATAAACATAGAAATTGGATAGAGTTATTTTTAACTCAGTACTATGATCCTATGTATAAACATTCTTTATTAAAATCTAATAGAAATATAGTTTACAAGGGAAATAGAAGCGAAGTAATGGAGTATATCGAAAAGTTGGAGAGATAG
PROTEIN sequence
Length: 368
MKKLSVTNDFKSIVLNDTKLIDVRAPIEFEKGAMINAVNMPILNNEERHIIGICYKEKGNEEATKLGYEIVSGEIKEARVKAWTEFTNENPNSMIYCFRGGSRSTIAQQWIYEETGKDIVKLDGGYKAFRNYLINSLDPKEIKSKPLILSGYTGSGKTILLHKINNSIDLEGLAHHRGSTFGHHITPQPTQINFENNLAYSLIKHKNNNYKYMVLEDEGKNIGKSFIPKLFFEYMKSGDVIFLEASLNERIDNILEEYVINGQEEHREVFKNEELALEAWLNDMIASMERVKGKLGDRIHTIVNELKLAYNEQLTTNKIDKHRNWIELFLTQYYDPMYKHSLLKSNRNIVYKGNRSEVMEYIEKLER*