ggKbase home page

NECEvent2014_4_7_scaffold_93_3

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(3940..4650)

Top 3 Functional Annotations

Value Algorithm Source
LytTr DNA-binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK17_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 236.0
  • Bit_score: 379
  • Evalue 1.80e-102
  • rbh
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EKY28055.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 17 similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 236.0
  • Bit_score: 379
  • Evalue 2.60e-102
ypdB; Transcriptional regulatory protein YpdB similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 233.0
  • Bit_score: 175
  • Evalue 1.50e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium celatum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 711
ATGAAGATAGCTATATGTGAAGATCAAGTTGTACAAATTAATTTACTTAATAATCATATTAAAAAATGGGCTAAGGAAAAAGATATTGAAATATCAATTGATAATTTTACAACAGCAGAATCATTTTTATTTGAATGGTCAGATTATGATCAATACGACATTATATTTTTAGATATAAAGTTAAGCAAAATGTCAGGAATTGAATTGTCTAATATAATAAGAGAAAAAAATAAAAATATAGATATAGTATTTGTAACAGGATTTTTTAAATATGCATTACATGGATATAAAGTTCGTGCATTACAATATTTAATAAAACCTATTAAGACAATAGATTTATATTATTGTTTAAATAGCACATTAGATAGAATTACTAGTGAAAAAGAAGATTCTTCACTAGTTTTAGAAACAGGAAAAAAAATTATAAAATTAGATTATAATAAAATACAGTATTTTATAATGTTTTCTCCATATATAGATATTCATACAAGTACTGAAAAAATTACTATAAGAAAGAATATAGGTGAGATAGAAAAGATTTTGCCAAGTGAATATTTTATTAGATGCCATAGATCTTATATAGTAAATGTAAGATATATTAAATCAATAATAAAAAATAATGTATTATTAGAAAATGGAGTAAAAATACCTATAAGTAGAGGAAAATATAAAGAAGTTAATGATACTTTTATAAATTATATTTGTGAATAA
PROTEIN sequence
Length: 237
MKIAICEDQVVQINLLNNHIKKWAKEKDIEISIDNFTTAESFLFEWSDYDQYDIIFLDIKLSKMSGIELSNIIREKNKNIDIVFVTGFFKYALHGYKVRALQYLIKPIKTIDLYYCLNSTLDRITSEKEDSSLVLETGKKIIKLDYNKIQYFIMFSPYIDIHTSTEKITIRKNIGEIEKILPSEYFIRCHRSYIVNVRYIKSIIKNNVLLENGVKIPISRGKYKEVNDTFINYICE*