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NECEvent2014_4_7_scaffold_486_4

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(4170..4742)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4R6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 190.0
  • Bit_score: 333
  • Evalue 1.60e-88
  • rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EEH98905.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 190.0
  • Bit_score: 333
  • Evalue 2.20e-88
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 166.0
  • Bit_score: 188
  • Evalue 2.30e-45

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 573
ATGAATATGTCTAATATTATTCCTATAGGGATATTAAATAAACTTAAAGATGAAAAGCTTAAGAAAAGTAATGTTAGATTAGCTATAGAAGGAGATAAGGAAGCTTTTGGTATTTTAATTAAAGAGAATTTAAAGTCCTTATATATTGTTTGTAGGGGAATTCTAAATAGTGAATATGATATGGAAGATGCTCTTCAAAATACTATATTAAAGGCATATGAGAAAATTCCATATCTAAAAAATGAGGAGTTTTTTAAAACCTGGTTAACAAGAATTTTAATAAATGAATGTAACAATATAATAAGAAAAAATAAAAAGATTACTTATATTGAGGATTCACAAATAAATAATGAAGTTTATGAGGATAAATATAAAAATATAGATTTAATTAGAGCCATGGATTCATTAAATTCTGAGTTAAGGTTAACCATGTGGTTATTTTATTTTGAAGATATGTCTATAGAAGAAATAAGTAATACTCTAAAAATTGCTAAGGGAACTGTAAAGTCTAGATTAAATAGAGGAAGGGAAAAAATTTATAATATTATGAGTGAGGTATGTAATCATGAATAA
PROTEIN sequence
Length: 191
MNMSNIIPIGILNKLKDEKLKKSNVRLAIEGDKEAFGILIKENLKSLYIVCRGILNSEYDMEDALQNTILKAYEKIPYLKNEEFFKTWLTRILINECNNIIRKNKKITYIEDSQINNEVYEDKYKNIDLIRAMDSLNSELRLTMWLFYFEDMSIEEISNTLKIAKGTVKSRLNRGREKIYNIMSEVCNHE*