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NECEvent2014_4_7_scaffold_356_6

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(2990..4096)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA54_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 370.0
  • Bit_score: 685
  • Evalue 4.10e-194
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagofo similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 370.0
  • Bit_score: 685
  • Evalue 5.80e-194
rpoD; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 366.0
  • Bit_score: 645
  • Evalue 1.00e-182

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1107
ATGTTGGATGAAAAAACAAAAGCTAAGCAAGTTAAAAAGGAAAATGAAGATAGAAGTAATAAAATGAATATAGTTAAGAACTTGCTTGATAAAGGGAAGAAAAGTGGTACTTTAACATATAAAGAAATACTGGATGAACTTGAAAATATAGATTTAGGTCCAGAACAAATAGAAAAGATTTATGAAGTGTTAGAGTCTATGGGAATAGAAGTTATAGGTGAACCAAGTGGCGAAGAAGAAGTAGAAGAAGAATTAGATTTAACTATTCCAGAAGGTATTGCTATTGATGACCCAGTTAGAATGTACTTAAAAGAAATAGGAAAAGTTCCTCTATTATCATCAGAAGAAGAAATAGAGTTAGCAAATAGAATTGAACAAGGTGACCAAAGAGCTAAAAAGAAATTAGCAGAAGCTAACTTAAGATTAGTTGTAAGTATAGCTAAAAGATATGTTGGTAGAGGAATGTTATTCTTAGACCTTATTCAAGAAGGAAACTTAGGTTTAATTAAAGCTGTAGAAAAGTTTGATTACAGAAAGGGCTTTAAATTCTCAACTTATGCTACATGGTGGATAAGACAGGCAATTACAAGAGCAATTGCTGACCAAGCGAGAACTATTAGAATACCAGTTCATATGGTAGAAACTATAAATAAATTAATAAGAGTTCAAAGACAATTATTACAAGAATTAGGTAGAGATCCATTCCCAGAAGAAATTTCAAAAGTAATGGATTTACCAGTAGATAAGGTTAGAGAAATTCAAAAAATTGCTCAAGAGCCAGTATCTTTAGAAACACCTATAGGTGAAGAAGAAGATTCACATTTAGGAGATTTTATACCAGATGATGATGCTTTAGCACCTGCAGAAGCAGCTGCATTTACAATGCTTAAGGAACAACTAATAAATGTCTTAGATACTTTAACTCCAAGGGAAGAAAAAGTACTAAGATTAAGATTTGGTTTAGACGATGGTAGAGCAAGAACTCTAGAAGAAGTTGGTAAAGAATTCAACGTAACTAGAGAGAGAATAAGACAAATTGAAGCTAAGGCACTTAGAAAATTAAGACACCCTTCAAGAAGTAAAAAATTAAAGGATTATTTAGATTAG
PROTEIN sequence
Length: 369
MLDEKTKAKQVKKENEDRSNKMNIVKNLLDKGKKSGTLTYKEILDELENIDLGPEQIEKIYEVLESMGIEVIGEPSGEEEVEEELDLTIPEGIAIDDPVRMYLKEIGKVPLLSSEEEIELANRIEQGDQRAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQELGRDPFPEEISKVMDLPVDKVREIQKIAQEPVSLETPIGEEEDSHLGDFIPDDDALAPAEAAAFTMLKEQLINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLD*