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NECEvent2014_4_7_scaffold_567_11

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: 11261..12301

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 346.0
  • Bit_score: 591
  • Evalue 6.30e-166
tRNA dihydrouridine synthase A n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2Z7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 346.0
  • Bit_score: 591
  • Evalue 4.50e-166
  • rbh
dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 336.0
  • Bit_score: 342
  • Evalue 1.30e-91

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1041
ATGGAAAAATATATTTCAAAGGTTGAAACTCCAAAGGTTAGTATTGCACCTATGGTAGATAAAACTCATCGTCACTTTAGATATTTTTCAAGACTTCTAACTAAAGAAGCTCTTTTATATACAGAAATGGTAACTGCTCAATCAATAATAAATGGAAATAGAGATAAAATACTATATTTTAGGGAGGAAGAAGGTCCAGTAGCTCTTCAAATTGCTGCTTCTAATCCTGAAGAAGCTTATAAAGCTGTTAAACTTGCTGAAGACTATAATTATACTGAAATAAACTTAAATTGTGGGTGCCCTTCTGATAGGGTTTCAGGAAATTTAATGGGAGCTGCATTAATGTCATCAAAGGATTTAGTATATGAAATTCTTTCTGCTATGAAAGAAGCTACTAAAAAACCAGTAACTATAAAGCATAGAATAGGAATAGACGGAACTGGTATAATAGAAGAAGAAAAAAGTAAGGTTATCTTGGAAGGATATGATGATTTACTAGAATTCTTAAGTACTATTTCTAAGGCTAAACCTGATAGATATACTATTCATGCACGTTCTGCCATATTAAAAGGTCTAAGTCCAAAAGATAATAGAGAAATACCACCTCTTGATTATGATATAGTTTATAGATTAAAAAAAGAATTTGATTATTTGAATATAGAAATTAATGGTGGATTTAAAACAATAGATTCAATTAAAGATGCTTTAACAAAAGTAGATGGTGTTATGATTGGAAGATCTGCATATGAAGATTGTTATCTTTTAGCAAATTTTTATAAACTTTATGATGATTTTGAAGATAAAAAACCAATATCTAGAGGGACTATTATTAAATCCTATATTCCTTACATAATGGAAGAACTTGAAAAAGGAAATAGTGTTCATGCTTTAGTATCTCCTCTTCATAGTTTATTTCAAGGCCAAAATGGAAGTAAGAAATATAAACAACTTTTATCTTCATCAAATGTAAAAAAGGAAACAATATTAGAAGTTTTAAATAATATTATTGAAACTATGCCTCAAGATATTATATGGAACTAG
PROTEIN sequence
Length: 347
MEKYISKVETPKVSIAPMVDKTHRHFRYFSRLLTKEALLYTEMVTAQSIINGNRDKILYFREEEGPVALQIAASNPEEAYKAVKLAEDYNYTEINLNCGCPSDRVSGNLMGAALMSSKDLVYEILSAMKEATKKPVTIKHRIGIDGTGIIEEEKSKVILEGYDDLLEFLSTISKAKPDRYTIHARSAILKGLSPKDNREIPPLDYDIVYRLKKEFDYLNIEINGGFKTIDSIKDALTKVDGVMIGRSAYEDCYLLANFYKLYDDFEDKKPISRGTIIKSYIPYIMEELEKGNSVHALVSPLHSLFQGQNGSKKYKQLLSSSNVKKETILEVLNNIIETMPQDIIWN*