ggKbase home page

NECEvent2014_4_7_scaffold_414_6

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: 2306..2548

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=2 Tax=Clostridium RepID=R9C4S1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 80.0
  • Bit_score: 157
  • Evalue 5.00e-36
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 80.0
  • Bit_score: 157
  • Evalue 7.00e-36
rpsR; 30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 80.0
  • Bit_score: 138
  • Evalue 6.80e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 243
ATGAAAGATATGAAAAGATCTGGAAAAATGAGAAGATCTAAGAGAAAAGTTTGTGCTTTTTGCGTAGATAAAGCTGAAACAATAGATTATAAAGATATTACTAAGCTAAGAAAGTTCGTAACAGAAAGAGGTAAGATATTACCAAGAAGAATTTCTGGAACTTGCGCTAAGCACCAAAGAGAATTAACAAGTGCTATAAAGAGATCAAGAAACATAGCATTATTACCATTTACAACTGAGTAA
PROTEIN sequence
Length: 81
MKDMKRSGKMRRSKRKVCAFCVDKAETIDYKDITKLRKFVTERGKILPRRISGTCAKHQRELTSAIKRSRNIALLPFTTE*