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NECEvent2014_4_7_scaffold_444_12

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(12841..13536)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein VanR n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CLD4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 231.0
  • Bit_score: 443
  • Evalue 1.00e-121
  • rbh
Regulatory protein VanR {ECO:0000313|EMBL:EOR27976.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 231.0
  • Bit_score: 443
  • Evalue 1.40e-121
vanR1; regulatory protein VanR similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 231.0
  • Bit_score: 388
  • Evalue 1.10e-105

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 696
ATGTTTAATGTATTAGTAGTTGATGACGAAAAGGAAATTAGAGATGCCATTGACATATATTTAAGAGGAGAAGGGATGAAGGTTTTTAAAGCACAGGATGGTGTTGAAGCCTTAGAAATTCTTGATAGAGAAAAGATACATTTAATTGTACTAGATATAATGATGCCAAGAATGGATGGAATAAAGACTTGTTTAAAAATTAGAGAAAAAAGAAACTTACCAATAATTATGTTATCAGCTAAAGGAGAAGATAGTGATAAAATTTTAGGCCTTAATGTTGGAGCTGATGATTATATAGCAAAACCATTTAACCACTTAGAGCTAGTAGCAAGGGTTAAATCACAATTAAGAAGATACCAAAAGCCATTAGAGATGGAAGGTGAAAGCCCTGATATAATAGAAGTGAAGGATTTAGTGATTAATAATAAAGAAAAGACAATTTATTTAAGAGGAGATGAAGTTAAGGTAACAGCAACTGAATTTAAAATACTTCAACTTTTAGCTTCAAATTTAGGTAAAGTTTTTTCTATTAAAGAAATATATGAAAAAGTTTGGGAAGAGCCATTTTATAGAAGTGAAAATACTGTAACTGTTCATATAAGAAGAATAAGAGAAAAAATAGAATTAAACACAAAAGACCCAGAATATATAAAAGTTGTGTGGGGAGTTGGATATAAAATTGAGAGAGAAAATTAA
PROTEIN sequence
Length: 232
MFNVLVVDDEKEIRDAIDIYLRGEGMKVFKAQDGVEALEILDREKIHLIVLDIMMPRMDGIKTCLKIREKRNLPIIMLSAKGEDSDKILGLNVGADDYIAKPFNHLELVARVKSQLRRYQKPLEMEGESPDIIEVKDLVINNKEKTIYLRGDEVKVTATEFKILQLLASNLGKVFSIKEIYEKVWEEPFYRSENTVTVHIRRIREKIELNTKDPEYIKVVWGVGYKIEREN*