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NECEvent2014_4_7_scaffold_697_6

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(3281..4090)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine transport system permease protein PotC n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA47_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 270.0
  • Bit_score: 487
  • Evalue 9.20e-135
Spermidine/putrescine transport system permease protein PotC {ECO:0000313|EMBL:EOR26197.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 270.0
  • Bit_score: 487
  • Evalue 1.30e-134
spermidine/putrescine transport system permease protein PotC similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 269.0
  • Bit_score: 405
  • Evalue 1.30e-110

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 810
ATGGTAAAAGCATTAGAAAATTTTATTAAAAGATTTTATTTAGTATTAGTTTTCATATTCTTATATATGCCTATTGCTGCCTTAATAATATTTTCTTTTAATGATTCAAAAACTATGGGAAAATGGTCTGGCTTTACTTTAAAATGGTATGTTGAATTATTTAATAATGAAAATATATTAAAAGCCCTTTTCTTCACAGTAGTTATTGCAATTATTTCTTCTTTAGTTGCTACAGTAATCGGAACCTTAGCAGCTATTGGAATTAATAAGATGAAGGGACCTAAAAAAGCTCTACTATTAAATATAAATTATTTACCTGTATTAAATCCTGATATAGTAACTGGTATAGCGTTAATGAGTTTATTTATCTTCTTAAGACCTCTTACTAAATTAGATTTTGGATTTACTACAATGTTACTTGCTCATATTACATTTAATATACCATATGTAATACTTGCAGTTTTACCTAAGCTTAGACAATTACCTGAAAATATAGAAGAAGCAGCTTTAGACTTAGGTGCTACTCCTGCTTACACTTTAAGAAAGATAATATTGCCTCAAATTAAACCTGGCATCTTTGCTGGTATGCTAATGGCATTTACTATGTCAGTTGATGACTTTGTTATAAGCTTCTTTACTGCTGGTCCAGGAGTTACCAATCTATCAATTGAAATTTTTGCTATGGCAAGAAGAGGTATTAAACCTGAAATTAACGCCCTTTCTACATTGATGTTTGTAACGGTATTAACCCTTTTATTAATAGCTAATAGAAAGGAATTTACAAGAGGTGATAAAGTTGAAAAAGCTTAA
PROTEIN sequence
Length: 270
MVKALENFIKRFYLVLVFIFLYMPIAALIIFSFNDSKTMGKWSGFTLKWYVELFNNENILKALFFTVVIAIISSLVATVIGTLAAIGINKMKGPKKALLLNINYLPVLNPDIVTGIALMSLFIFLRPLTKLDFGFTTMLLAHITFNIPYVILAVLPKLRQLPENIEEAALDLGATPAYTLRKIILPQIKPGIFAGMLMAFTMSVDDFVISFFTAGPGVTNLSIEIFAMARRGIKPEINALSTLMFVTVLTLLLIANRKEFTRGDKVEKA*