ggKbase home page

NECEvent2014_4_7_scaffold_1147_3

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: 3338..4084

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 248.0
  • Bit_score: 478
  • Evalue 5.50e-132
rph; ribonuclease PH (EC:2.7.7.56) similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 248.0
  • Bit_score: 446
  • Evalue 3.60e-123
Ribonuclease PH n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1W3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 248.0
  • Bit_score: 478
  • Evalue 4.00e-132
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 747
ATGAGAATAGATGGAAGAAAAAATGATCAAGTGAGATCAACTAAAATTACTAGAGGATATACAAAGTATGCAGAAGGCTCTGTATTAATAGAAGTTGGTGATACAAAGGTAATTTGTACAGCTTCTATAGAAGATAAAGTACCACCTTTTTTAAAAGGTCAAGGTGAAGGGTGGATAACAGCTGAATATAATATGTTACCAAGATCTACTGGAACAAGAAAGGTTAGAGATATAGCTAGACTAAAGATAGATGGTAGAACTATGGAGATTCAAAGGTTAATAGGAAGAGCCTTAAGATCTGTTATGGATTTAAAAGCACTTGGTGAAAAAACTATTTGGATAGATTGTGATGTAATACAAGCAGATGGAGGTACAAGAACAACTTCTATTACTGGTGCCTTTGTGGCTTTAGTAGATGCAGTCAATAAACTTCATAAAGAAAAACCTTTTGAAGTTTATCCAATAAGAAAATTTGTAAGTGCAACAAGTGTAGGAATTCTTAATGAAGAAAAAATACTGGACTTATGTTATGAGGAAGACTCTAATGCAAAAGTAGATATGAATGTAATAGCTACAGATGAAGGAGAGTTTATAGAAATTCAAGGTACAGGTGAAGAATCTCCATTTAGTAGAAGTGAATTAAATGAATTACTAGATTTAGCTCAAAAAGGAATTAAGCAAATGGTTCAAATCCAAAAAGATGCATTAAAGATGGATGCACTATGGATAGGGACTGGAGGAAAATAG
PROTEIN sequence
Length: 249
MRIDGRKNDQVRSTKITRGYTKYAEGSVLIEVGDTKVICTASIEDKVPPFLKGQGEGWITAEYNMLPRSTGTRKVRDIARLKIDGRTMEIQRLIGRALRSVMDLKALGEKTIWIDCDVIQADGGTRTTSITGAFVALVDAVNKLHKEKPFEVYPIRKFVSATSVGILNEEKILDLCYEEDSNAKVDMNVIATDEGEFIEIQGTGEESPFSRSELNELLDLAQKGIKQMVQIQKDALKMDALWIGTGGK*