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NECEvent2014_4_7_scaffold_2079_1

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(88..1491)

Top 3 Functional Annotations

Value Algorithm Source
Retron-type reverse transcriptase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IH46_THETR similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 466.0
  • Bit_score: 603
  • Evalue 1.50e-169
  • rbh
DNA polymerase {ECO:0000313|EMBL:KGK86575.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 467.0
  • Bit_score: 772
  • Evalue 2.70e-220
Retron-type reverse transcriptase similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 466.0
  • Bit_score: 603
  • Evalue 4.30e-170

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Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1404
TTGAAAGTTTCGAAGAATAATCAAAGATTGCAGAAAACTAAATATTTAGGCTCTAGTGCTAAAGATAGAGTGGAACTCGAAGATAGGCAAAGAGTGCATAGAGGATTCTCGGCAACTTCAAAAGGAGAAACAAGTGAATTTGAATATGGCTCATTAGAGAGAATATTATCAAGAGATAATCTACTTACAGCAATGAAAAGAGTTATTTCTAATAAAGGTAGCCATGGAATTGATGGAATGACAGTCTATGAACTTAGACAATTTCTTAAAGATAACTGGTTACAAATAAAAGAAAACATTTTGAATAATGAGTACAAGCCGATGCCGGTTAGGAGAGTTGAAATACCAAAACCTAATGGTGGAACCAGATTATTAGGAATACCGACAGTTTTGGATAGGTTTATTCAACAAGCAATTGCTCAAGAGTTAAATTATATTTACGACGAGAACTTTTCAGAAAATAGTTTCGGCTTCCGCCCTCGAAGAGGGGCGAAAGATGCTATAAGAAAAGCAGAAACTTATATTAATGAGGGGTATAGATGGGTCGTAGATATAGACCTAGAAAAATTCTTTGATAAAGTTAACCACGATATACTTATGTATAAACTATCAAGAAATATAAAAGACAAGAGAGTACTAAGGTTAATAAGAAAATATCTTCAATCTGGAATAATGATTAACGGAATAGTAGTTGCAAGTGAGGAAGGAACTCCGCAAGGTGGTCCACTAAGTCCGCTTTTATCTAATATAATGCTAGATGAATTGGATAAGGAACTAGAAAAAAGAGGGCATAAATTCTGTCGCTACGCTGACGATTGCAATATTTACGTTAAGAGTAAAAGAGCTGGAGAAAGGGTTATGGATAATATAACAAATTTCATAGAAGCTAAGCTGAAATTAAATGTAAATAGAAGTAAAAGTGCAGTAGAGAGACCGTGGAAAAGAAAGTTTCTAGGATTTACGATAATGCTATCCTTTGGGAAAGCTTGTTCTACTATATCGAAACAATCATTAAAACGATATAAGGATAAAATTAGAGAGATACTATCTAGGTCAAAGCCGATGACTTTGGAACAAAGAATAGTTAAATTAAATCAAACTAATATTGGATGGATTAATTATTATTCTATAGCCAAATGCAAAGGAATTGTTCAGCAATTAGATAAGTGGATAAGACAAAGATTGAGAATGTGTATATGGAAACAATGGAAAAAGGTTAAAACAAGATACAAAAACCTTAGAAAGTTAGGAATAAATCACTATCAGTCAATTAAATTTGCCAATACCCGTAAAGGATATTGGAGAATAGCTAATAGTGCAATATTAAAGACTACACTTACAAATCAATTCTTTACCGACTTAGGCTTGAAAAGCCTAACACGCCAATATATTAAAATTCATTAA
PROTEIN sequence
Length: 468
LKVSKNNQRLQKTKYLGSSAKDRVELEDRQRVHRGFSATSKGETSEFEYGSLERILSRDNLLTAMKRVISNKGSHGIDGMTVYELRQFLKDNWLQIKENILNNEYKPMPVRRVEIPKPNGGTRLLGIPTVLDRFIQQAIAQELNYIYDENFSENSFGFRPRRGAKDAIRKAETYINEGYRWVVDIDLEKFFDKVNHDILMYKLSRNIKDKRVLRLIRKYLQSGIMINGIVVASEEGTPQGGPLSPLLSNIMLDELDKELEKRGHKFCRYADDCNIYVKSKRAGERVMDNITNFIEAKLKLNVNRSKSAVERPWKRKFLGFTIMLSFGKACSTISKQSLKRYKDKIREILSRSKPMTLEQRIVKLNQTNIGWINYYSIAKCKGIVQQLDKWIRQRLRMCIWKQWKKVKTRYKNLRKLGINHYQSIKFANTRKGYWRIANSAILKTTLTNQFFTDLGLKSLTRQYIKIH*