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NECEvent2014_4_7_scaffold_646_2

Organism: NECEvent2014_4_7_Anaerococcus_vaginalis_29_18_partial

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(267..1037)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWB9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 502
  • Evalue 2.00e-139
  • rbh
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily {ECO:0000313|EMBL:EEU12002.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="An similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 502
  • Evalue 2.80e-139
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 248.0
  • Bit_score: 436
  • Evalue 5.00e-120

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Taxonomy

Anaerococcus vaginalis → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
ATGGCAGATACAAAAGAATCTCTTGAAAGAAAAAAAGAGATCAAAGAAAAATTTGAACAATTTTATAAAACAAGGGACAAGGATCTGAGAAATGAGCTTATAGAAGATCATATGTATATAGTCGACATCCTTTCCAACAAATACGTAGGAAAAGGAATCGAAAAAGATGACCTTTATCAAGTAGCATCTCTTGGTCTAATCTATGCCATTGATAGGTACGATCCATCAAAAGGATACGAATTTTCATCCTTTGCAACCCCAACAATAATGGGAGAGCTAAAAAGATATTTTAGGGACAAGGGCTGGGTAATAAGAGTTCCAAGAAGAATTCAAAATTTGTACAAAAAAATAAATGTAGCAAAAAAAATTCTTCCTCAAGAGCTCCAAAGAACCCCAACTATAAAAGACATTGCAGCTTACCTTGGAGAAGACGAAGAAACAATTCTTGAAACAATAGAGGCAAGCAAGGTTTATTCCCCACAAAGTTTGGATATGAAATACCAAGTCCAAAAAGGGGAAAATTCCGTAGATTTATCCGACATGATAGGAGAAGACGACAAAAATTTTGATTCAGTAGAATTAAAAGATTTAATAGATAAGTCAACCGAAAGACTAAACGACTTGGAAAAACAAATTTTAGAATTAAGATACTACGAAGGAAGAACCCAAGTAGATATAGCAAATAAACTTTCTATTTCTCAAATGACAGTATCAAGAATAGAGAAAAAAATTCTACAAAAATTCACAATAGAAATGCAAAAAATGCAATAA
PROTEIN sequence
Length: 257
MADTKESLERKKEIKEKFEQFYKTRDKDLRNELIEDHMYIVDILSNKYVGKGIEKDDLYQVASLGLIYAIDRYDPSKGYEFSSFATPTIMGELKRYFRDKGWVIRVPRRIQNLYKKINVAKKILPQELQRTPTIKDIAAYLGEDEETILETIEASKVYSPQSLDMKYQVQKGENSVDLSDMIGEDDKNFDSVELKDLIDKSTERLNDLEKQILELRYYEGRTQVDIANKLSISQMTVSRIEKKILQKFTIEMQKMQ*