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NECEvent2014_4_7_scaffold_2985_2

Organism: NECEvent2014_4_7_Veillonella_parvula_rel_39_50_v_partial

partial RP 1 / 55 BSCG 1 / 51 ASCG 2 / 38
Location: 1435..2088

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQ44_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 218.0
  • Bit_score: 435
  • Evalue 3.40e-119
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 218.0
  • Bit_score: 435
  • Evalue 9.50e-120
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ25501.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veill similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 218.0
  • Bit_score: 435
  • Evalue 4.70e-119

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 654
ATGTTATATACCAACGAAGAACCTTTAGTACAAAAAACATGTATTAAAACTGCAAACTTACAACATGACAACTATCAGTCAGAAAAATTAGAAACACAGGCATTAACATCTCATTCTTTATTATCGAAAGCTGATGAGTCTAGCCGAAGTATTCCAGAAAAACTGAAATTACAGACCCTCGTCTGTGGTCATCAAGTTTTATCGTCCTTGTCGGACAAGAGTCTCGTGTCCATTTGTCAAAAACCGAATATGCGGGTTCAGACGGTAGGCTATCAGCCGTGGTCCGTTGATGAGCTTCGTCATGATGCGGCACAAATCGAGCTCTGTCGCAGGTATCGACCGCTCATCTTGCACTATACGAATCGCATGGGAAACCGTGAATTCCGCGAGGACGTAGAGAGCTATCTATGGGCCATCCTCATAGAATCGATTTATAGCTTCGATTTGGAAGGTCCTGTACCATTCGCAGGCTTTGTGAAAGCTGGCATCATGTACGGTTACATGAGGTACTGGAAGCGGGAGCGATTGCGTTATCGCCGTGAAATTCACATCCCAGATCGTACCACCGATGATGGAGAAGTCGCCTTTGGTATGGATATCTTCGCATCTGGCGAGAATGTGGCGGATATGGTGATGAGTGCTGACGAAGAGCAT
PROTEIN sequence
Length: 218
MLYTNEEPLVQKTCIKTANLQHDNYQSEKLETQALTSHSLLSKADESSRSIPEKLKLQTLVCGHQVLSSLSDKSLVSICQKPNMRVQTVGYQPWSVDELRHDAAQIELCRRYRPLILHYTNRMGNREFREDVESYLWAILIESIYSFDLEGPVPFAGFVKAGIMYGYMRYWKRERLRYRREIHIPDRTTDDGEVAFGMDIFASGENVADMVMSADEEH