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NECEvent2014_5_1_scaffold_47_34

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(40266..40955)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein VanR n=4 Tax=Clostridium butyricum RepID=B1QZU8_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 230.0
  • Bit_score: 401
  • Evalue 5.70e-109
  • rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ETI91707.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 230.0
  • Bit_score: 399
  • Evalue 2.30e-108
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 230.0
  • Bit_score: 391
  • Evalue 1.70e-106

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
GTGTATAATGTTTTGGTTGTAGACGATGAAAAAGAAATTAGGGATGCCATTGAAATATATCTTAGAGGAGAAAAGTTAAATGTAATAAAGGCTGAAGATGGTTTAGAGGCTTTAGATATATTAGAGGGTAAGCAAATACATTTAATTATATTAGATATAATGATGCCTAAATTAGATGGAATAAAGACATGCTTAAAAATTAGGGAAAGCAAGAATATTCCTATAATAATGTTATCAGCAAAAGGAGAAGATTCTGATAAAATTTTAGGATTAAATGTAGGTGCTGATGATTACATAACAAAGCCATTTAACAATTTAGAGTTAGTAGCGAGGGTTAAGTCTCAATTAAGAAGATATGAAAAACCTTTGAGTATAGAAGAAAGTTCAGTTATAAAGGTAAAGGACTTAGAAATAGATACTTTGCTTAAAAAAATAACTGTAAGAGGAGAAGAGATAAAAGCTACAGCAACAGAGTATAAAATATTGCTTTTATTGGCTTCAAATTTAGGTCGAGTTTTTTCAATAAAAGAAATATATGAAAAGGTTTGGGAAGAGCCGTTTTATAAAAGTGAGAATACAGTCACTGTTCATATAAGAAGAATAAGAGAGAAAATAGAATTAAATACAAAGGAGCCAGAGTATATTAAGGTGGTGTGGGGTATTGGCTACAAAATTGAAAAAGAAAATTAA
PROTEIN sequence
Length: 230
VYNVLVVDDEKEIRDAIEIYLRGEKLNVIKAEDGLEALDILEGKQIHLIILDIMMPKLDGIKTCLKIRESKNIPIIMLSAKGEDSDKILGLNVGADDYITKPFNNLELVARVKSQLRRYEKPLSIEESSVIKVKDLEIDTLLKKITVRGEEIKATATEYKILLLLASNLGRVFSIKEIYEKVWEEPFYKSENTVTVHIRRIREKIELNTKEPEYIKVVWGIGYKIEKEN*