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NECEvent2014_5_1_scaffold_47_44

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(47987..48721)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine(38-40) synthase (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 244.0
  • Bit_score: 351
  • Evalue 2.60e-94
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:AIY83113.1};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 244.0
  • Bit_score: 351
  • Evalue 1.30e-93
tRNA pseudouridine synthase A n=1 Tax=Clostridium colicanis 209318 RepID=N9WCL0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 244.0
  • Bit_score: 335
  • Evalue 4.10e-89
  • rbh

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 735
ATGAGAAATATAAAGTTAACTATAGAATATGATGGAACAAGCTACGGGGGATGGCAGAAGCAAAAGAATAACAGAACCATTCAACAGTGCATTGAAGAAGCAATTAAGTTACTTACAGGTGAAGAGGTTGAATTAATAGGAAGTTCTAGAACTGATGCTGGGGTTCATGCTAAAGGTATGGTTGCAAACTTCATTACCAATAGTAAAATTCCATCTGATAAATTTAGAGAAGCTATTAATACTAAATTACCAGATGATATAGGAATAATTAAATCTGAAGAAGTTGATAAGAACTTTCATTCAAGATATGATAGTAAAGGTAAAACTTACTGTTATACATTAGTAAATAGATATGAAAAAGTATGCTTAGGAAGAAGTTATGTATATCAAGTTAGAGATGAATTAAATTATAATCTAATGAAAGATGCTGCAAAATATTTTTTAGGTAAGCATGACTTTAAGGCTTTTAAAACTAATGGAAGTTCTGTAAAGACTTCAGTAAGAACAATAAGTGGATTAGAACTAGAGTTAAAGGGTGATGTTCTAAAGATATTTATTAGTGCAGATGGATTTCTTTATAATATGGTAAGAATTATAGTAGGTACCTTAATTGAAGTTGGAAAAGGAAAAATAAAACCAGAAGATATAGAAAGTATAATAAGAAACGGAGATAGAAGTAAGGCAGGACCTTGCGTACCACCTAATGGATTAGTATTAGAAAAAGTTTTTTATTAA
PROTEIN sequence
Length: 245
MRNIKLTIEYDGTSYGGWQKQKNNRTIQQCIEEAIKLLTGEEVELIGSSRTDAGVHAKGMVANFITNSKIPSDKFREAINTKLPDDIGIIKSEEVDKNFHSRYDSKGKTYCYTLVNRYEKVCLGRSYVYQVRDELNYNLMKDAAKYFLGKHDFKAFKTNGSSVKTSVRTISGLELELKGDVLKIFISADGFLYNMVRIIVGTLIEVGKGKIKPEDIESIIRNGDRSKAGPCVPPNGLVLEKVFY*