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NECEvent2014_5_1_scaffold_47_52

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(53817..54182)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=2 Tax=environmental samples RepID=R6G0M9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 121.0
  • Bit_score: 223
  • Evalue 8.60e-56
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 121.0
  • Bit_score: 223
  • Evalue 1.20e-55
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 121.0
  • Bit_score: 216
  • Evalue 5.00e-54

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Taxonomy

Clostridium sp. CAG:221 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCAAGAATAGCAGGTATTGACCTACCAAGAGAAAAAAGAGTTGAAATAGGTCTAACATATATATTCGGAATTGGTTTAGCAACATCTCAAAAGATTTTAGCTGAAACTGGAATAAATCCGGATACAAGAGTTAAAGATTTAACTGAAGATGAAGTTAATGCAATTAGAACATTTATAAAAGAAATGAATGTTGAAGGTGATTTAAGAAGAGAAGTTGCTTTAAACATTAAGAGATTACAAGAAATCGGATGCTACAGAGGAATTAGACATAGAAAAGGTCTTCCAGTTAGAGGACAAAAAACTAAGACTAATGCGAGAACAAGAAAAGGTCCTAAGAAGACTATCGCTAATAAGAAGAAGTAA
PROTEIN sequence
Length: 122
MARIAGIDLPREKRVEIGLTYIFGIGLATSQKILAETGINPDTRVKDLTEDEVNAIRTFIKEMNVEGDLRREVALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTIANKKK*