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NECEvent2014_5_1_scaffold_47_60

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(58486..58983)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=2 Tax=environmental samples RepID=R6KUD7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 165.0
  • Bit_score: 303
  • Evalue 1.20e-79
  • rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environm similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 165.0
  • Bit_score: 303
  • Evalue 1.60e-79
rpsE; 30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 165.0
  • Bit_score: 300
  • Evalue 2.10e-79

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Taxonomy

Clostridium sp. CAG:265 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 498
ATGAGAATCGATCCTAGTCAACTAGACCTTAAAGAAAAGGTTGTTTATATAAACAGAGTTACTAAGGTTGTTAAGGGTGGTAGAAACTTCAGATTCAGCGCTCTAGTTGTTGTTGGTGACGAAAACGGACACGTTGGAGTTGGAATGGGAAAATCTATCGAAATTCCAGTAGCAATCAAAAAGGGAATAGAAGATGCTAAGAAAAACTTAGTAAAAGTTTCTATGGTTGGAACAACTGTTCCTCATGAAATATATGGAACTTTCGGAACAGGAAAAGTTCTTATAATGCCAGCTAAAGAAGGTACAGGAGTTATTGCTGGGGGTCCTGCAAGAGCTGTACTTGAATTAGCAGGATTAAAGGATGTTAGAGCTAAGTCATTAGGTTCAAACAATCCAAGAAACATGGTAAATGCAACTATCAACGGATTAGCAAACTTAAGAACAGCTGAAGATATAGCTAAATTAAGAGGAAAATCTGTTGAAGAGATTCTAGGTTAG
PROTEIN sequence
Length: 166
MRIDPSQLDLKEKVVYINRVTKVVKGGRNFRFSALVVVGDENGHVGVGMGKSIEIPVAIKKGIEDAKKNLVKVSMVGTTVPHEIYGTFGTGKVLIMPAKEGTGVIAGGPARAVLELAGLKDVRAKSLGSNNPRNMVNATINGLANLRTAEDIAKLRGKSVEEILG*