ggKbase home page

NECEvent2014_5_1_scaffold_47_62

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(59381..59923)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=2 Tax=Clostridium botulinum E RepID=RL6_CLOBA similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 180.0
  • Bit_score: 323
  • Evalue 1.20e-85
  • rbh
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 180.0
  • Bit_score: 323
  • Evalue 3.30e-86
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=508767 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 180.0
  • Bit_score: 323
  • Evalue 1.70e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCAAGAGTAGGTAGATTACCAATAGCTATTCCTGCTGGCGTAACTGTAACTGTATCAGCAGATAATGTTGTTACAGCTAAGGGACCAAAAGGTGAGCTAGTAAATGCTATGCACAAAGACATTAAGATAGTGGTTGAAAACAACGAAGTTGTTGTTACTAGACCTAGTGATGTAAAAGAGCACAGAGCTCTTCACGGATTAACAAGAGCACTTATTAATAACATGGTAATTGGAGTTAACGAAGGTTACCAAAAGACTTTAGAATTAGTAGGTGTTGGTTATAGAGCTCAACTACAAGGAAAGAAACTTGTAATGAACCTTGGATACTCACATCCAGTTGAAATAGAACCAATGAATGGAATTACTTTCGAAACTCCTGCTGCAACAAAAGTTGTTATCAAAGGTATAGATAAGCAAGTTGTTGGAGCACAAGCGGCTGATATCAGACGTTGGAGAAAGCCAGAACCATATAAGGGTAAAGGAATTAAATTCGAAGGCGAAGTAATCAGACGTAAAGAAGGTAAAACTGGTAAGAAATAA
PROTEIN sequence
Length: 181
MSRVGRLPIAIPAGVTVTVSADNVVTAKGPKGELVNAMHKDIKIVVENNEVVVTRPSDVKEHRALHGLTRALINNMVIGVNEGYQKTLELVGVGYRAQLQGKKLVMNLGYSHPVEIEPMNGITFETPAATKVVIKGIDKQVVGAQAADIRRWRKPEPYKGKGIKFEGEVIRRKEGKTGKK*