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NECEvent2014_5_1_scaffold_47_70

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(62860..63525)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8N9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 221.0
  • Bit_score: 402
  • Evalue 3.20e-109
  • rbh
rpsC; ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 221.0
  • Bit_score: 402
  • Evalue 6.90e-110
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sull similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 221.0
  • Bit_score: 402
  • Evalue 3.40e-109

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Notes

100 % to Clostridium paraputrificum Jill Banfield (7/15/14)

Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 666
GTGGGTCAAAAAGTACATCCTCACGGACTTAGAGTAGGTGTTATTAAAGAGTGGGATGCAAAGTGGTATGCTAATAAAAAAGACTTTGCTGATAACTTAGTTGAAGATAACAAGATCAGAGAATATGTAAAAAAAGAATTATTCTCAGCAGGTATTTCAAAGATCGAAATAGAAAGAGCTGCTAAGAGAATTAAGTTAAACATACACACTGCAAAGCCAGGTGTTGTTATTGGAAAAGGTGGAGCTGGAATCGAAGCCTTAAAGCAAAAGATAAATAAGTTAATTGGCGGAAAGAATGTTTTAATAAACATTGTTGAAGTTAAGAATGCTGAAGCAGATGCTCAATTAATGGCAGAAAATATTGCTGCTCAATTAGAAAAGAGAATCTCATTCAGAAGAGCTATGAAGCAAACAATTCAAAGAGCTATGAAACACGGAGTAAAGGGTGTTAAGACTGCTTGTTCAGGAAGATTAGGAGGAGCAGAAATAGCTAGAACAGAACAATATCACGAAGGAACAATTCCACTACAAACTTTAAGAGCAGACATTGATTATGGATTTGCTGAAGCAGATACAACATACGGTAAGATCGGAGTTAAGGTTTGGGTTTATAATGGAGAAGTTCTTCCAACTAAAAAAGTTGAAAAGGAAGAAGTTGACGCGTAA
PROTEIN sequence
Length: 222
VGQKVHPHGLRVGVIKEWDAKWYANKKDFADNLVEDNKIREYVKKELFSAGISKIEIERAAKRIKLNIHTAKPGVVIGKGGAGIEALKQKINKLIGGKNVLINIVEVKNAEADAQLMAENIAAQLEKRISFRRAMKQTIQRAMKHGVKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLRADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVEKEEVDA*