ggKbase home page

NECEvent2014_5_1_scaffold_47_75

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(65444..66064)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPE4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 206.0
  • Bit_score: 361
  • Evalue 7.70e-97
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.; similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 206.0
  • Bit_score: 361
  • Evalue 1.10e-96
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 206.0
  • Bit_score: 351
  • Evalue 2.20e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 621
ATGCCTACAGTAGGATTATTTAATAAAGAAGCAAAGCAAGTTGGAGAAATTCAATTAAACGATAATGTTTTCGCAGTTGAAGTTAATAAGGATGCAATGCACCAAGTAGTTGTTGCATTACTTGCAAACAAGAGACAAGGAACTCAATCAGCTAAGACAAGAGCTGAAGTAAGAGGAGGCGGAATCAAGCCTTGGAGACAAAAGGGAACAGGTAGAGCAAGACAAGGTTCTATAAGAGCTCCACAATGGATTAAGGGTGGTGTTGTTTTTGCACCAAAGCCAAGAGATTACAGAATGTCAGTACCAAAGAGCATGAGAAGAGTAGCTATGAAGTCTGCATTAACTTGTAAGGTTCAAAATGAAGAGATGATCGTTTTAGAAAATCTTGAATTTGAAGCAATCAAGACTAAGTCTATGGCAGAAATGCTAAAAGCTTTCAATGCTAATAAGACATTAATAGTAACAGCTGAATCAAACGAAGTGGTTTATAAGTCAGCTAGAAATATTGAAGGAGTTTCAGTAATTCCTGTAAACAACATCAATGTTTATGATTTACTAAAGTTTGAAAAAGTGATCATGACTAAAGATGCTGTATCAAAGATTGAGGAGGTGTACGCATAA
PROTEIN sequence
Length: 207
MPTVGLFNKEAKQVGEIQLNDNVFAVEVNKDAMHQVVVALLANKRQGTQSAKTRAEVRGGGIKPWRQKGTGRARQGSIRAPQWIKGGVVFAPKPRDYRMSVPKSMRRVAMKSALTCKVQNEEMIVLENLEFEAIKTKSMAEMLKAFNANKTLIVTAESNEVVYKSARNIEGVSVIPVNNINVYDLLKFEKVIMTKDAVSKIEEVYA*