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NECEvent2014_5_1_scaffold_271_7

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(9722..13279)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2361
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 999.99
  • Bit_score: 2304
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3XIZ5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2361
  • Evalue 0.0
  • rbh

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3558
ATGCTTGACATGGGCGGTTTGTCATGCCCCCAGGCCGGCCGACGGGTCGGTTGTAGGAGTTCTCGGAAGGACCGCACATTGGCCGCCACGCGCACTGCGTCGAAGAACACCAACGCCATTTCGCCCCAGTCGGGACGAATCTCATTCGCCAAGATTCACGAGCCGTTGGAGGTTCCCAACCTTCTCGACTTGCAGGTTGAGTCGTTCAACTGGCTTGTTGGCAACGAGATATGGCAGTCCCATGTGGACGCCGCCCTTGCAGAGGGACGCACCGATATCAACACCAAGTCCGGCCTCGAGGAGATCTTTGAGGAGATCTCCCCGATCGAGGACTACTCCCAGACGATGTCCTTGTCTTTCCGGGATCATCGTTTCGAGGATCCCAAGCACAGCGTCGACGAGTGCAAGGATCGCGACACCACCTACGCGGCCCCGCTGTTCGTGACCGCGGAGTTCATGAATAACGAGACCGAGGAGATCAAGTCCCAGACGGTCTTCATCGGTGACTTCCCGCTCATGACCTCGAAGGGCACCTTCATCATCAACGGCACCGAGCGTGTCGTCGTCTCCCAGCTGGTGCGTTCCCCGGGTGTCTACTTCGAGAAGACCGCCGACAAGACCTCCGACAAGGATATCTTCACGTGCAAGGTGATTCCGTCGCGTGGCGCTTGGCTCGAGTTCGAGATCGACAAGCGCGACACCGTCGGAGTTCGTCTGGACCGTAAGCGCAAGCAGAACGTCACCGTTTTCCTCAAGGCCCTCGGCTGGACCGCTGACCGCATCCTCGAGGAGTTCGGCGACTACGAGTCGATCCGTCAGACCCTCGAGAAGGATCACGGCGTCGAAACTCAGGATCAGGCGCTGCTGGACATCTACAAGAAGCTGCGTCCTGGCGAGCCGCCGTCCCGTGACGCCGCCCAGCAGCTGCTCGAGAATTACTACTTCAACCCGAAGCGCTACGATCTGGCCAAGGTTGGTCGTTACAAGATCAACAAGAAGCTCGGTCTGTTTCTGCCGTTCGACCAACAGGTGCTGACGATCGACGACATCGTCGCGGCGATCCACTACGTGTGCGCCCTGCACGAGGGCACCGAAATGCTCCCGCGCGAGGGACGCGACGACATCGTCGTCGAGGCCGACGACATCGACCATTTCGGCAACCGCCGTCTGCGCACCGTCGGCGAGCTCATCCAGAATCAGCTGCGTACCGGTCTTGGTCGGATGGAGCGTGTCGTGCGTGACCGCATGACCACCCAGGACATCGAGGCCATCACCCCGCAGACCCTGATCAACATCCGCCCGGTGACAGCCGCGATCAAGGAATTCTTCGGAACCTCCCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTGGCCGAGATGACCCACAAGCGTCGTCTGTCGGCCCTGGGACCCGGCGGTCTGTCCCGTGACCGCGCCGGCATGGAGGTTCGAGACGTCCACCCGTCGCACTACGGTCGTATGTGCCCGATTGAGACCCCTGAGGGTCCGAACATCGGTCTGATTGGTTCGCTGGCCTCCTTCGCCCGCGTCAACGCCTTCGGCTTCATCGAGACCCCGTACCGTAAGGTCATCGACGGGCAGGTCACCGACCAGGTCGTCTACCTGACCGCGGACGAGGAGGATCGTCACGTCATCGCCCAGGCCAACGCCAAGGTCGATGACGACGGCCGTTTCGTCAACGATCGCGTCCTGGTGCGCCAGCGTCACGGCGAGGCCGACGAGGTCCCGAACTCCGAGGTCGACTACATGGACGTCTCTCCGCGCCAGATGGTGTCGGTGGCGTCCGCCCTCATCCCGTTCCTCGAGCACGACGATGCCTCCCGAGCCCTCATGGGCGCCAACATGCAGCGTCAGGCCGTGCCGCTGGTGCGTACCGAGGCTCCGTTCGTCGGAACCGGTATGGAGTACCGCTGTGCGGTTGACGTCGGTGACGTCACCCTCGCCGAGAAGGCAGGTTCGGTCCTGTCGGTGAGCGCTGACCTCATCGACATCGCCTGCGACGACGGCACCTACCAGACCTACAAGCTGGAGAAGTTCCGTCGCTCCAACGCCGGTACCTGTATCAACCAGCGTCCGCTGGTCACGGTGGGGCAGCGTGTCGAGGTCGGTACCCCGCTTGCTGACGGCCCGTCAACGGACAAGGGCGAGCTCGCCCTCGGCCGCAACATGCTGGCTGCCTTCATGCCGTGGCAGGGCCTCAACTACGAGGACGCCATCATCCTGTCCCAGCGCATCGTCTCCGACGACGTCCTCACCTCGATCCACATCGAGGAGCACGAGGTCGACGCCCGTGACACCAAGTTGGGCGCTGAGGAGATCACGCGGGACATCCCGAACGTCTCCGAGGACATGCTGGCCAACCTGGACGAGAACGGCATCGTGCGCATCGGAGCCGAGGTCGGTACCGGCGACATCCTCGTCGGCAAGGTCACCCCGAAGGGCGAGACCGAGCTGACTCCTGAGGAGCGTCTGCTGCGCGCCATCTTCGGTGAGAAGGCCCGCGAGGTCCGCGACACCTCCCTCAAGGTTCCCCACGGTGAGGAGGGCACCGTCATCGGCGTGCGCGTGTTTGACGCCGAGAACGGTGACGAGCTGGCCCCCGGAGTCAACCAGATGGTTCGCGTCTACGTCGCTCAGAAGCGCAAGATCTCGATCGGTGACAAGCTCGCCGGACGTCACGGTAACAAGGGTGTCATCTCGAAGATCCTGCCCGTCGAGGACATGCCGTTCCTGCCGGACGGCACCCCGGTTGACATCATCCTCAACCCACTGGGTGTGCCTTCCCGTATGAACGTCGGTCAGGTGCTCGAGATGCACCTCGGTTGGATCGCCCACTCCGGCTGGGACATCACCCAAGCCGAGGGCGACTGGGCCGAGCGTCTGCGCGAGGTCGGTCTCATCGACGTCCCCGAGGGATCCCGTCTGGCCACCCCGGTCTTCGACGGTGCCACGGAGGAGGAGATCACCGGTCTGTTGCAGTACGGTCACCCGACCCGCGACGGCGACATGCTCGTCGACGCCGACGGCAAGGCCACCCTCTTCGACGGTCGTACCGGCGACCCCTTCCCGTCCAAGGTGGGTGTCGGCTACATGTACATGCTGAAGCTGCACCACTTGGTCGACGACAAGATCCACGCCCGTTCCACCGGTCCGTACTCGATGATCACCCAGCAGCCCCTTGGTGGTAAGGCCCAGTTTGGTGGTCAGCGATTCGGCGAGATGGAGGTGTGGGCCATGGAGGCCTACGGCGCCGCCTGGGCGCTGCAGGAGCTGCTCACCATCAAGTCCGATGACGTTCCCGGCCGTGTCAAGGTCTACGAGGCGATCGTCAAGGGCGAGAGCATCCCGGAGCCGGGCATCCCCGAGTCCTTCAAGGTACTCGTCAAGGAGATGAAGTCGCTCTGCCTGAACGTGGAGGTGCTCAACTCGGAGGGCCAGGAGATCGATCTGCGCACCTCCGACGAGGACACCCGGTCCGGTCTGGGTATCGACATCGGGCGTCGCCCCGGTGCCGACAACGCCATGGCCGACTGA
PROTEIN sequence
Length: 1186
MLDMGGLSCPQAGRRVGCRSSRKDRTLAATRTASKNTNAISPQSGRISFAKIHEPLEVPNLLDLQVESFNWLVGNEIWQSHVDAALAEGRTDINTKSGLEEIFEEISPIEDYSQTMSLSFRDHRFEDPKHSVDECKDRDTTYAAPLFVTAEFMNNETEEIKSQTVFIGDFPLMTSKGTFIINGTERVVVSQLVRSPGVYFEKTADKTSDKDIFTCKVIPSRGAWLEFEIDKRDTVGVRLDRKRKQNVTVFLKALGWTADRILEEFGDYESIRQTLEKDHGVETQDQALLDIYKKLRPGEPPSRDAAQQLLENYYFNPKRYDLAKVGRYKINKKLGLFLPFDQQVLTIDDIVAAIHYVCALHEGTEMLPREGRDDIVVEADDIDHFGNRRLRTVGELIQNQLRTGLGRMERVVRDRMTTQDIEAITPQTLINIRPVTAAIKEFFGTSQLSQFMDQNNPLAEMTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASFARVNAFGFIETPYRKVIDGQVTDQVVYLTADEEDRHVIAQANAKVDDDGRFVNDRVLVRQRHGEADEVPNSEVDYMDVSPRQMVSVASALIPFLEHDDASRALMGANMQRQAVPLVRTEAPFVGTGMEYRCAVDVGDVTLAEKAGSVLSVSADLIDIACDDGTYQTYKLEKFRRSNAGTCINQRPLVTVGQRVEVGTPLADGPSTDKGELALGRNMLAAFMPWQGLNYEDAIILSQRIVSDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEDMLANLDENGIVRIGAEVGTGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEEGTVIGVRVFDAENGDELAPGVNQMVRVYVAQKRKISIGDKLAGRHGNKGVISKILPVEDMPFLPDGTPVDIILNPLGVPSRMNVGQVLEMHLGWIAHSGWDITQAEGDWAERLREVGLIDVPEGSRLATPVFDGATEEEITGLLQYGHPTRDGDMLVDADGKATLFDGRTGDPFPSKVGVGYMYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMEAYGAAWALQELLTIKSDDVPGRVKVYEAIVKGESIPEPGIPESFKVLVKEMKSLCLNVEVLNSEGQEIDLRTSDEDTRSGLGIDIGRRPGADNAMAD*