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NECEvent2014_5_1_scaffold_809_3

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(2484..4235)

Top 3 Functional Annotations

Value Algorithm Source
Zn-dependent hydrolase, RNA-metabolizing, CPSF (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 563.0
  • Bit_score: 874
  • Evalue 2.10e-251
Ribonuclease J n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X8C3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 583.0
  • Bit_score: 1149
  • Evalue 0.0
  • rbh
Ribonuclease J {ECO:0000313|EMBL:EPH06386.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 583.0
  • Bit_score: 1149
  • Evalue 0.0

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGAAGCGGTCAGGACACATCGGGGCGAAGCTGTCGGAGTTTCCCGATAGGCTTCACGCCGTGGCTAATACTGGATTGACGACACCCCCGGACCTGCAACCGGACGTTCTGCGCATCATTCCCCTCGGCGGCCTGGGAGATGTCGGACGCAACATGTCGTGCTACGAAATCAATGGGGAGATCCTTCTCATTGACTGTGGGGTGCTCTTCCCCGAGGACGACCATCCGGGAGTTGACCTGCTCCTGCCGCACCTGGACTACCTCGACGACGACAAACTGTCGCGGGTCACGGCCCTGTTGCTGACCCACGGCCACGAGGACCACATCGGTGCGGTGCCGTTCCTGCTCAAGCGTCGTCCGGACATCCCGGTCTACGGATCCAAGCTCACCCTTGCCCTGGTGGAGGCCAAGCTCAAGGAGCACCGCATCCGCAACTACGACCTGCGCGTGGTGCGTGAGGGCGACGCCGCCGAGATCGGCGAGGAGTTCGACGTCGAGTTCGTCGCCGTCAACCACTCCATCCCCGACGCGCTGGCCGTCTACGTCAAGACCGACGCCGGGTCGATCCTCAACACCGGCGACTTCAAGATGGACCAGCTGCCCATCGACGGGCGGATCACCGACCTGCGGGCCTTCGCCCGGCTCGGTGAGGAGGGTGTCGACGTCTTCATGGTCGACTCCACCAACGCCGAGGTGCCCGGGTTCGTGCGTTCCGAGCGTGACCTCGCCCCGGCCATCGAGCAGACCTTCGACCAGGCCACCCAGAAACTCATCGTTGCCACCTTCGCCTCACACGTCCACCGCGTCCAGCAGGCGGTCGACGCCGCCGTGCGGCACGGTCGCAAGATCTGCTACGTCGGGCGTTCCATGGTGCGCAACATGGCGATCGCCCGCGACCTGGGCTACCTCAAGGTGCCCGACGACTCACTCATCGAATTGCGTGATCTCGACAAGTACCCCGACGACAAGGTCGCCATCATCTGCACCGGTTCCCAGGGCGAGCCGCTGTCGGCCCTGGCCCGCATCGCCCACGGTGAGCACCGGGACATCTCGGTGGGGGAGGGTGACGTCGTGCTCATGGCGAGCTCGCTCATCCCCGGTAACGAGAACGCCGTCACCCGCGTCATCAATGGTCTCATGAGCTGCGGTGCCACGGTGGTGCACAAGGGCAATGCGCTGGTTCACGTCTCCGGGCACGCTGCCCAGGGCGAGCTGCTCTACGCCTACAATGTCGTGCGACCGCGCGCCGTCATGCCGATCCACGGCGAGTACCGGCATCTCACGGCGAATGCCCGTATCGCGGTGTCCACCGGTGTGCAGCCCGAGGACGCCATCGTCGTCACCGATGGCGGCGTCGTCGACCTGGACGATGGCCGGGCCAGCGTCGTCGGCAAGGTGGATGCTTCCTACATTCTCGTCGAGGGAACCGGGGTGAGCGAACTCACCCCCGATGCCCTGGCCGATCGCAAGATTCTCGGTGAGGAGGGGTTCATCTCGGTGTCGGCCGCCATCAACCCCAAGAGCGCGAGCATCGTGTCGGGGCCAGACATCAAGGCTAAGGGATTCGCCGAGGACGATCGTGGCTACGACGAGATCCGCGACCGACTCGTGAGCGAGTTGCAGTCGGCGATGCGCGGCGGCATGAGCGACCAGCACAAACTCCAGCAGGTTGCCCGACGCACCATCGGGCGCTGGGTGGCGCAGACCTACCGACGTCGCCCCATGATCGTGCCGACCATCATCGTCGTGTGA
PROTEIN sequence
Length: 584
MKRSGHIGAKLSEFPDRLHAVANTGLTTPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEILLIDCGVLFPEDDHPGVDLLLPHLDYLDDDKLSRVTALLLTHGHEDHIGAVPFLLKRRPDIPVYGSKLTLALVEAKLKEHRIRNYDLRVVREGDAAEIGEEFDVEFVAVNHSIPDALAVYVKTDAGSILNTGDFKMDQLPIDGRITDLRAFARLGEEGVDVFMVDSTNAEVPGFVRSERDLAPAIEQTFDQATQKLIVATFASHVHRVQQAVDAAVRHGRKICYVGRSMVRNMAIARDLGYLKVPDDSLIELRDLDKYPDDKVAIICTGSQGEPLSALARIAHGEHRDISVGEGDVVLMASSLIPGNENAVTRVINGLMSCGATVVHKGNALVHVSGHAAQGELLYAYNVVRPRAVMPIHGEYRHLTANARIAVSTGVQPEDAIVVTDGGVVDLDDGRASVVGKVDASYILVEGTGVSELTPDALADRKILGEEGFISVSAAINPKSASIVSGPDIKAKGFAEDDRGYDEIRDRLVSELQSAMRGGMSDQHKLQQVARRTIGRWVAQTYRRRPMIVPTIIVV*