ggKbase home page

NECEvent2014_5_1_scaffold_1189_1

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 1..1227

Top 3 Functional Annotations

Value Algorithm Source
Putative CRISPR-associated helicase Cas3 family protein n=1 Tax=Propionibacterium avidum 44067 RepID=M9VAG7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 408.0
  • Bit_score: 774
  • Evalue 4.40e-221
putative CRISPR-associated helicase Cas3 family protein similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 408.0
  • Bit_score: 774
  • Evalue 1.20e-221
CRISPR-associated helicase cas3 {ECO:0000313|EMBL:EGY78258.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 408.0
  • Bit_score: 774
  • Evalue 6.20e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
GTCACCGACGACATCACCCAACGCGGCACATCGGTCACGGCCCCGGCGCGCGGCATCACCGTCGAGACGATGACCGACTCCCTCGACGATCTCGCGGCTCGGCTCGAGGAGCAGACGTCCGAGGGCGGCTGCGTCGGGATCATCCGCGACACCGTTGCACGAGCCCAGGAGACCTTCGACGTACTCCGGCAGCGTCTCGACTGCGAGGTCGTCCTCGTTCATTCCAGGTTCGTCGCACCACAGCGTGCCCGTCGGGAGTCCGACCTCGTCAGGCGTCTTGGACGCTCTGACCAGGCCCGTCCTCATCGCATCGTCGTCGTCGGCACCCAGGTGCTCGAGCAGTCCCTCGACGTTGACTTCGATCTGCTCGTCAGCGACATCGCGCCCATGGACCTCCTCCTCCAGCGCATCGGTCGATTGCACCGACACGACCGCGCACGTCCGCCCCGACTTCGTGACGCCGTCTGTCTGGTCACCGGCGTCGACAGCTGGGACGACGACGGTCCGAGATTCAGCCGTGGAGTCGACCTTGTCTACGAACCGGACGCCCTCATGCGCACCGCGGCCCTCCTCGACGATCTGCCGTCCAGTGGGATCTCGATCCCGCGGGACATCCCTCGACTCGTCCGACAGGCCTATCAGGAGCCCTTCCCCTGGCCTGACGCCTGGACGGCCAGGGGCGAGAAGGCCGCACTCGATGCCAGGTCGAATCGTCAGTTGGCAGCGACTCGCGCCATGGCCTTCCGTCTGGCCGATCCATTCGGCGCATCGAGCCTCATGAAGGGGCTCACCGACATGGCTTCCTCCGATCCCGAGAACACCCGCGGCCACGCGTCAGTGCGCGACTCCGAGGATTCCATCGAGGTCATTGTCGTCCAGCAGTCGGGCTCCGGACATCGGCTGCTCGACGACATCGGGGAATACTCCGGAACAGAGCTGCCGCTGTTCGGTGCCCCTGACGGCGATCTGGCCCGAGCCGTCGCATCGTGCACCGTCACCCTTCCCCGGTCACTGTCGAACCCATGGGACATCGACAGGACCATCGCCGAGCTGGAGGCCGCGCCGATCGACCTCAGCTCATGGCAGACATCCCCGTGGCTTCGGGGACAACTCGTCCTCGTCCTCGACGTCCATGGCAATTCCACATTGTTGGGACATCCACTCCACTACGATCGCGATCAGGGGCTCATCGTCGAGCCCCTTCCCCAGAACGGAGCACCGGTATGA
PROTEIN sequence
Length: 409
VTDDITQRGTSVTAPARGITVETMTDSLDDLAARLEEQTSEGGCVGIIRDTVARAQETFDVLRQRLDCEVVLVHSRFVAPQRARRESDLVRRLGRSDQARPHRIVVVGTQVLEQSLDVDFDLLVSDIAPMDLLLQRIGRLHRHDRARPPRLRDAVCLVTGVDSWDDDGPRFSRGVDLVYEPDALMRTAALLDDLPSSGISIPRDIPRLVRQAYQEPFPWPDAWTARGEKAALDARSNRQLAATRAMAFRLADPFGASSLMKGLTDMASSDPENTRGHASVRDSEDSIEVIVVQQSGSGHRLLDDIGEYSGTELPLFGAPDGDLARAVASCTVTLPRSLSNPWDIDRTIAELEAAPIDLSSWQTSPWLRGQLVLVLDVHGNSTLLGHPLHYDRDQGLIVEPLPQNGAPV*