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NECEvent2014_5_1_scaffold_1214_4

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(2969..3616)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X9F1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 215.0
  • Bit_score: 411
  • Evalue 6.70e-112
  • rbh
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EPH01983.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 215.0
  • Bit_score: 411
  • Evalue 9.40e-112
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 215.0
  • Bit_score: 399
  • Evalue 4.40e-109

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
CGCGGCTTGTCGGTGACGATGCCCCACAAGGTTGATCTCAGTGAGTTGGGGGAGACCGACGAGACCGTCGAACTGCTCGGAGCGGCGAACACCTGGGTACGTCGTGACGGGAGAACCATCGTCCGTAACACCGACGTGACCGGCGCCGGGGCTGCGCTTCGGTCTCGGGGCGTCACCGGGGTTGAGAAGGTCGTCATGCTCGGGGCGGGGGCGACGGCACGGTCAGTTCTTGCCGCTGCCGTCCAATTGGGGGCAGACGAGGTCATCATCATGTCGCGCTCTCGCGATCGGTCGACCGAGATCCTTGAGCTTGCCAACCGTCTCGGGATCCGCGTCGCCTGGTTGCCCTTCGAGTCCGAGCCGTCGCGTTGTGACCTCATGGTCTCGACGGTTCCGGCCGGGTCCCTCATGGACCGGGCTGAGGACCTCGCTGCCCGTGCTGACGCCGTCTTCGACGTCATTTACGACCCGTGGCCGACGCCGCTGACGGTGGCTGGGGAGAACGCCGGCATCACGATTATCGATGGCCTCGACCTGCTCGCCGGACAGGCCGTCGACCAGATTCGTCTCATGACGGGCCATGACGTTCCCATGGATATCTTGAGGTCCACAGCGCAGAACGCTCTGGCTGAGCGCGCACGCCTTTGA
PROTEIN sequence
Length: 216
RGLSVTMPHKVDLSELGETDETVELLGAANTWVRRDGRTIVRNTDVTGAGAALRSRGVTGVEKVVMLGAGATARSVLAAAVQLGADEVIIMSRSRDRSTEILELANRLGIRVAWLPFESEPSRCDLMVSTVPAGSLMDRAEDLAARADAVFDVIYDPWPTPLTVAGENAGITIIDGLDLLAGQAVDQIRLMTGHDVPMDILRSTAQNALAERARL*