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NECEvent2014_5_1_scaffold_1984_3

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 997..1536

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3XLU6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 179.0
  • Bit_score: 345
  • Evalue 3.80e-92
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propioniba similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 179.0
  • Bit_score: 343
  • Evalue 1.50e-91
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 179.0
  • Bit_score: 340
  • Evalue 3.40e-91

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGGAACAGCAGGCAACAGTGGAGGTTGTCGTCGGTCGGGTGGGACGTGCCCATGGTCTGCGGGGAGACGTCGTCGTCGAGGTTCGTACCGACGAGCCCGACGAGAGGTTCGACGTTGGTGCGACAGTCTGCATCGAAGGCACGCGGCGGGAGTTGACAGTTGCCAGATCACGATGGGCCAAGGGCAGCCTGATCGCCGCCTTCAAGGAGGTCGCCGATCGGAATGGCGCCGAGGAGCTGCGAGGTTCGGTGTTGGTGGCTGACGTCGAGGCCGATGAGAAGCCAGCTGATCCAGAAGAGTTCTGGGACCGTCAGTTGCGGGGACTAGCAGTGGTTGACGAGTCGGGTCAGGCACGGGGAACCGTCAAGGACATTCTCCACCTGCCGGCCCAGGATGTGCTCGCCATCGATGTCGACGGCGACGAACATCTGGTGCCGTTCGTTCGCCAGCTCGTTCCCACCGTTGACGTCGCTGCCGGTCAGATCGTTGTCGCCAGTATCCCTGGACTTCTTGACGACGATGCCGAGGAGGCGAGGTAA
PROTEIN sequence
Length: 180
VEQQATVEVVVGRVGRAHGLRGDVVVEVRTDEPDERFDVGATVCIEGTRRELTVARSRWAKGSLIAAFKEVADRNGAEELRGSVLVADVEADEKPADPEEFWDRQLRGLAVVDESGQARGTVKDILHLPAQDVLAIDVDGDEHLVPFVRQLVPTVDVAAGQIVVASIPGLLDDDAEEAR*