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NECEvent2014_5_1_scaffold_2012_1

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 2..2287

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203576 species="Bacteria; A similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 762.0
  • Bit_score: 1491
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Propionibacterium avidum 44067 RepID=M9VF31_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 762.0
  • Bit_score: 1493
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 762.0
  • Bit_score: 1493
  • Evalue 0.0

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Taxonomy

Propionibacterium sp. KPL1852 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2286
GAAACCCACCAGGAGCTCATCTGCGCTCCGTGTCGTGAGCTCACCCTCACCGACGAGGTCCGATCCAGGGCCAGGACCCTGTTACCGGACCACCCCGAACTGGCGGACATGCTGGAACGAATCGCCGATGGTCAGGCTGTCGAGGGGATGGAAGCCCTCATGCCAGCCCTGGTCGACGAGATGGAGCTGCTCGTCGACGTCCTTCCCGAGCACGCCATGGTCATCCTCTCGGACCCCGAGATGGTGCGCTCCCGGGCAGCAGACCTGGTCCGCACCTCCGAAGAATTCCTGGGAGCCGGGTGGGCGGCTGCCGCCGGTGGTGGCCAGGCCCCGATCGACCTGGCGGCCTCGGGATACCGCAGCCTGTCCCACGTGAGGGCCCACTGTCTCGAGCGCGGCATGGCGTGGTGGTCGATGTCCTCCTTTGCCCTGGACGCCCCTGCCACGGATGCCCTTGCCGACGACGACGTCACGACCGCCCCGCGCACCGTCAACCCGCATCTGGAGGCCGTCGAACCGTGGCGCGGAGACGTGGAGGCGGCCGTCGAGGATCTCACCACCAGACTCGGTGAGGGCTGGACGGTCGTGCTGTGTGCCGAGGGTGAGGGCATCGCCAAGCGCATGGCGGAGCTGCTCGGTGAACATCACGTCGCGGCCAAGCTGGTCGACGAGGTCGACGCCGACATCACCGAGCCATGCGTCCAGGTCGTCCGGCTGCATCAGCGTCATGGTTTCGCCGCGGATTCCCTCAAACTGTTGGTGGCTTCCACCGGAGACCTCGCTGACTCCCAGGACCCAGCCGTCAGTGGCGAGCGGCGCATGCCCCGACGCCGTCGCAATCAGATCCAGCCGCTTGAGCTCAAGTCCGGCGACCTCGTCGTCCATGAGCAGCACGGTGTGGGCCGATACGTGGAGATGGTGCAGCGCACCGTGGGTGGGGCCACCCGCGAGTATCTCGTCATCGAGTACGCCCCCTCCAAGAAGGGTCAGCCCGGCGACCGTCTCTTCGTCCCCGTCAACTCTCTGGACCAGGTGACCCGCTATGTCGGTGGTGATGCTCCCAGTCTGGACCGGATGGGTGGCGCCGACTGGCGCAAGCGCAAGTCTCGTGCCCGCAAGGCAGTCCGTGAGATCGCCGCTGAACTCATCAAGCTCTATGCCGCCCGGCAGGCCACCAAGGGCCACGCCTTCGGCCCCGACACCGCCTGGCAGCGGGAGCTGGAGGACGCCTTCGCCTACGTCGAGACCCCTGATCAGCTCACCACCATCGCCGACGTCAAGCACGACATGGAACAGGTCGTCCCGATGGACCGCCTGGTCTGTGGCGACGTCGGTTACGGCAAGACTGAGATCGCGGTGCGCGCTGCCTTCAAGGCCGTCCAGGACGGCAAACAGGTGGCCGTGCTGGTGCCAACTACCCTTTTGGTGCAGCAGCACTTCCAGACCTTCACCGAGCGATACGCGGGGTTCCCGGTCAAGGTCGCGGCCCTGTCTCGATTCCAGACCGATGCCGAGGCTCGCGAGACCTTGGAGGGGATCAAGCGCGGCACGGTTGACGTCGTCGTCGGCACCCATCGCCTACTGGCCAAGGAGGTCGAGTTCAAGGATCTCGGCCTGGTCATCGTCGACGAGGAACAGCGCTTCGGTGTCGAGCACAAGGAGGCCCTCAAGCGCATGAGGGTCAACGTCGACGTGCTGGCGATGAGCGCCACCCCGATCCCGCGCACCCTGGAAATGGCGGTGACCGGTATCCGTGAGATGAGCACGATCGCCACGCCGCCGGAGGAGCGTCATCCGGTGCTCACCTTCGCCGGCCCCTACGACGAGGGTCAGGTGGTTGCGGCCATCCGTCGCGAGTTGGCTCGTGAGGGTCAGGTCTTCTACATCCACAACCGGGTGCAGTCCATCGAGAAGACGGCGGCCAAACTGCGCGAGCTCGTCCCGGAGGCACGGATCGTCACCGCCCACGGCCAGATGAACGAGAAGCAGCTCGAGCAGATCATGGTGGACTTCTGGGAGCGTCGCGCCGATGTGCTGGTCTGCACCACCATCGTCGAGTCGGGTATCGACATCTCCACGGCCAACACCCTGCTCATCGATCGCGCCGACCGTATGGGCCTGTCTCAGCTGCACCAGTTGCGCGGTCGTGTTGGTCGCTCCCGGGAGCGCGGCTACGCCTACTTCCTCTACCCGGCTGACAAGCCGCTCTCCCAGACCGCCCACGATCGCCTGGCGACGATGGCCGCCCATACCGATCTGGGTGCCGGTATGGCTATCGCCATGAAG
PROTEIN sequence
Length: 762
ETHQELICAPCRELTLTDEVRSRARTLLPDHPELADMLERIADGQAVEGMEALMPALVDEMELLVDVLPEHAMVILSDPEMVRSRAADLVRTSEEFLGAGWAAAAGGGQAPIDLAASGYRSLSHVRAHCLERGMAWWSMSSFALDAPATDALADDDVTTAPRTVNPHLEAVEPWRGDVEAAVEDLTTRLGEGWTVVLCAEGEGIAKRMAELLGEHHVAAKLVDEVDADITEPCVQVVRLHQRHGFAADSLKLLVASTGDLADSQDPAVSGERRMPRRRRNQIQPLELKSGDLVVHEQHGVGRYVEMVQRTVGGATREYLVIEYAPSKKGQPGDRLFVPVNSLDQVTRYVGGDAPSLDRMGGADWRKRKSRARKAVREIAAELIKLYAARQATKGHAFGPDTAWQRELEDAFAYVETPDQLTTIADVKHDMEQVVPMDRLVCGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFQTFTERYAGFPVKVAALSRFQTDAEARETLEGIKRGTVDVVVGTHRLLAKEVEFKDLGLVIVDEEQRFGVEHKEALKRMRVNVDVLAMSATPIPRTLEMAVTGIREMSTIATPPEERHPVLTFAGPYDEGQVVAAIRRELAREGQVFYIHNRVQSIEKTAAKLRELVPEARIVTAHGQMNEKQLEQIMVDFWERRADVLVCTTIVESGIDISTANTLLIDRADRMGLSQLHQLRGRVGRSRERGYAYFLYPADKPLSQTAHDRLATMAAHTDLGAGMAIAMK