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NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

NECEvent2014_5_1_Propionibacterium_sp__HGH0353_63_13
In projects: NECEvent2014_5_1

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Description

16S rRNA gene is 99% to Propionibacterium sp. H456

Displaying items 51-100 of 546 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_1_scaffold_479 175_007_scaffold_479
Species: Propionibacterium sp. HGH0353 (83.33%)
12 9046 bp 65.27 14.72 86.26
NECEvent2014_5_1_scaffold_511 175_007_scaffold_511
Species: Propionibacterium sp. HGH0353 (75%)
12 8467 bp 62.44 16.62 87.87
NECEvent2014_5_1_scaffold_346 175_007_scaffold_346
Species: Propionibacterium sp. HGH0353 (58.33%)
12 12553 bp 66.12 14.39 93.99
NECEvent2014_5_1_scaffold_428 175_007_scaffold_428
Species: Propionibacterium sp. HGH0353 (90.91%)
11 10154 bp 64.29 12.56 97.32
NECEvent2014_5_1_scaffold_459 175_007_scaffold_459
Species: Propionibacterium sp. HGH0353 (63.64%)
11 9445 bp 64.66 13.82 91.60
NECEvent2014_5_1_scaffold_216 175_007_scaffold_216
Species: Propionibacterium sp. HGH0353 (81.82%)
11 20062 bp 61.90 14.41 97.75
NECEvent2014_5_1_scaffold_487 175_007_scaffold_487
Genus: Propionibacterium (100%)
11 8981 bp 63.21 15.40 80.37
NECEvent2014_5_1_scaffold_271 175_007_scaffold_271
Species: Propionibacterium sp. HGH0353 (72.73%)
11 16342 bp 63.33 14.71 90.37
NECEvent2014_5_1_scaffold_589 175_007_scaffold_589
Genus: Propionibacterium (63.64%)
11 7427 bp 62.92 14.16 95.17
NECEvent2014_5_1_scaffold_342 175_007_scaffold_342
Species: Propionibacterium acnes (54.55%)
11 12716 bp 65.91 14.17 95.12
NECEvent2014_5_1_scaffold_356 175_007_scaffold_356
Species: Propionibacterium sp. HGH0353 (72.73%)
11 12299 bp 63.29 12.99 93.01
NECEvent2014_5_1_scaffold_376 175_007_scaffold_376
Genus: Propionibacterium (100%)
11 11634 bp 64.16 13.77 92.65
NECEvent2014_5_1_scaffold_390 175_007_scaffold_390
Species: Propionibacterium sp. HGH0353 (60%)
10 11275 bp 64.72 12.20 90.89
NECEvent2014_5_1_scaffold_410 175_007_scaffold_410
Species: Propionibacterium sp. HGH0353 (60%)
10 10669 bp 64.37 14.19 97.91
NECEvent2014_5_1_scaffold_672 175_007_scaffold_672
Species: Propionibacterium sp. HGH0353 (80%)
10 9851 bp 62.72 13.38 93.28
NECEvent2014_5_1_scaffold_454 175_007_scaffold_454
Species: Propionibacterium sp. HGH0353 (90%)
10 9550 bp 64.06 15.08 95.09
NECEvent2014_5_1_scaffold_568 175_007_scaffold_568
Species: Propionibacterium sp. HGH0353 (70%)
10 7604 bp 64.16 15.25 92.32
NECEvent2014_5_1_scaffold_578 175_007_scaffold_578
Species: Propionibacterium sp. HGH0353 (60%)
10 7545 bp 61.52 7.63 91.17
NECEvent2014_5_1_scaffold_600 175_007_scaffold_600
Class: Actinobacteria (50%)
10 7374 bp 62.71 10.78 87.47
NECEvent2014_5_1_scaffold_374 175_007_scaffold_374
Species: Propionibacterium sp. HGH0353 (80%)
10 11659 bp 62.97 12.92 90.96
NECEvent2014_5_1_scaffold_655 175_007_scaffold_655
Species: Propionibacterium sp. HGH0353 (66.67%)
9 6814 bp 61.51 14.00 92.30
NECEvent2014_5_1_scaffold_663 175_007_scaffold_663
Species: Propionibacterium acnes (55.56%)
9 6760 bp 63.73 6.88 96.61
NECEvent2014_5_1_scaffold_421 175_007_scaffold_421
Species: Propionibacterium sp. HGH0353 (55.56%)
9 10417 bp 64.67 14.34 88.38
NECEvent2014_5_1_scaffold_682 175_007_scaffold_682
Genus: Propionibacterium (100%)
9 6570 bp 64.25 14.73 94.75
NECEvent2014_5_1_scaffold_438 175_007_scaffold_438
Genus: Propionibacterium (88.89%)
9 9892 bp 61.84 15.22 95.56
NECEvent2014_5_1_scaffold_490 175_007_scaffold_490
Species: Propionibacterium sp. HGH0353 (88.89%)
9 8951 bp 64.02 16.46 89.35
NECEvent2014_5_1_scaffold_492 175_007_scaffold_492
Species: Propionibacterium sp. HGH0353 (88.89%)
9 8901 bp 65.54 15.66 95.62
NECEvent2014_5_1_scaffold_505 175_007_scaffold_505
Genus: Propionibacterium (88.89%)
9 8667 bp 63.74 15.71 96.54
NECEvent2014_5_1_scaffold_509 175_007_scaffold_509
Genus: Propionibacterium (88.89%)
9 8512 bp 64.71 16.60 90.24
NECEvent2014_5_1_scaffold_777 175_007_scaffold_777
Species: Propionibacterium sp. HGH0353 (77.78%)
9 5684 bp 64.44 14.36 79.43
NECEvent2014_5_1_scaffold_526 175_007_scaffold_526
Genus: Propionibacterium (100%)
9 8238 bp 60.16 14.68 93.23
NECEvent2014_5_1_scaffold_531 175_007_scaffold_531
Genus: Propionibacterium (100%)
9 8127 bp 63.48 17.57 92.84
NECEvent2014_5_1_scaffold_559 175_007_scaffold_559
Species: Propionibacterium sp. HGH0353 (55.56%)
9 7749 bp 62.96 12.02 94.77
NECEvent2014_5_1_scaffold_572 175_007_scaffold_572
Genus: Propionibacterium (100%)
9 7590 bp 64.10 12.71 78.70
NECEvent2014_5_1_scaffold_584 175_007_scaffold_584
Species: Propionibacterium sp. HGH0353 (55.56%)
9 7471 bp 62.40 14.36 89.63
NECEvent2014_5_1_scaffold_591 175_007_scaffold_591
Genus: Propionibacterium (100%)
9 7417 bp 61.78 16.02 82.27
NECEvent2014_5_1_scaffold_611 175_007_scaffold_611
Species: Propionibacterium sp. HGH0353 (55.56%)
9 7212 bp 65.14 13.73 92.94
NECEvent2014_5_1_scaffold_388 175_007_scaffold_388
Species: Propionibacterium sp. HGH0353 (87.5%)
8 11279 bp 63.06 14.97 91.13
NECEvent2014_5_1_scaffold_389 175_007_scaffold_389
Species: Propionibacterium sp. HGH0353 (87.5%)
8 11278 bp 65.38 15.99 93.77
NECEvent2014_5_1_scaffold_399 175_007_scaffold_399
Species: Propionibacterium sp. KPL1852 (50%)
8 11066 bp 63.60 15.72 86.40
NECEvent2014_5_1_scaffold_917 175_007_scaffold_917
Species: Propionibacterium sp. HGH0353 (87.5%)
8 4845 bp 60.39 6.56 75.67
NECEvent2014_5_1_scaffold_662 175_007_scaffold_662
Species: Propionibacterium sp. HGH0353 (100%)
8 6764 bp 66.10 5.92 99.44
NECEvent2014_5_1_scaffold_411 175_007_scaffold_411
Species: Propionibacterium sp. HGH0353 (62.5%)
8 10640 bp 64.11 15.11 93.58
NECEvent2014_5_1_scaffold_415 175_007_scaffold_415
Species: Propionibacterium sp. HGH0353 (100%)
8 10614 bp 63.15 12.55 96.98
NECEvent2014_5_1_scaffold_434 175_007_scaffold_434
Species: Propionibacterium granulosum (75%)
8 9944 bp 63.12 7.98 85.05
NECEvent2014_5_1_scaffold_439 175_007_scaffold_439
Species: Propionibacterium sp. HGH0353 (50%)
8 9880 bp 64.77 14.74 95.89
NECEvent2014_5_1_scaffold_445 175_007_scaffold_445
Species: Propionibacterium sp. HGH0353 (75%)
8 9761 bp 65.71 10.11 89.16
NECEvent2014_5_1_scaffold_450 175_007_scaffold_450
Species: Propionibacterium sp. HGH0353 (100%)
8 9654 bp 64.85 13.89 86.23
NECEvent2014_5_1_scaffold_1511 175_007_scaffold_1511
Genus: Propionibacterium (75%)
8 2896 bp 58.84 8.29 80.28
NECEvent2014_5_1_scaffold_501 175_007_scaffold_501
Species: Propionibacterium humerusii (50%)
8 8747 bp 62.44 10.31 93.08
Displaying items 51-100 of 546 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.