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NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

NECEvent2014_5_1_Propionibacterium_sp__HGH0353_63_13
In projects: NECEvent2014_5_1

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Description

16S rRNA gene is 99% to Propionibacterium sp. H456

Displaying items 51-100 of 546 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_1_scaffold_2386 175_007_scaffold_2386
Genus: Propionibacterium (66.67%)
3 1973 bp 57.63 6.84 70.86
NECEvent2014_5_1_scaffold_1441 175_007_scaffold_1441
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3067 bp 63.58 6.85 100.16
NECEvent2014_5_1_scaffold_2125 175_007_scaffold_2125
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2183 bp 67.43 6.87 98.12
NECEvent2014_5_1_scaffold_663 175_007_scaffold_663
Species: Propionibacterium acnes (55.56%)
9 6760 bp 63.73 6.88 96.61
NECEvent2014_5_1_scaffold_4256 175_007_scaffold_4256
Species: Propionibacterium sp. HGH0353 (50%)
2 1156 bp 63.24 6.88 83.56
NECEvent2014_5_1_scaffold_377 175_007_scaffold_377
Species: Propionibacterium sp. HGH0353 (94.12%)
17 11565 bp 64.51 6.90 79.17
NECEvent2014_5_1_scaffold_1179 175_007_scaffold_1179
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3736 bp 63.12 6.91 93.23
NECEvent2014_5_1_scaffold_2325 175_007_scaffold_2325
Genus: Propionibacterium (100%)
3 2014 bp 58.24 6.93 85.95
NECEvent2014_5_1_scaffold_908 175_007_scaffold_908
Species: Propionibacterium sp. KPL1852 (75%)
4 4887 bp 61.29 6.94 96.19
NECEvent2014_5_1_scaffold_1320 175_007_scaffold_1320
Species: Propionibacterium acnes (100%)
2 3340 bp 65.87 7.01 96.56
NECEvent2014_5_1_scaffold_2663 175_007_scaffold_2663
Species: Propionibacterium sp. HGH0353 (100%)
3 1795 bp 63.40 7.02 90.92
NECEvent2014_5_1_scaffold_1856 175_007_scaffold_1856
Species: Propionibacterium sp. KPL1838 (100%)
1 2465 bp 63.89 7.06 99.92
NECEvent2014_5_1_scaffold_991 175_007_scaffold_991
Species: Propionibacterium sp. HGH0353 (75%)
4 4437 bp 64.73 7.07 89.38
NECEvent2014_5_1_scaffold_2113 175_007_scaffold_2113
Species: Propionibacterium sp. KPL1838 (50%)
2 2197 bp 63.91 7.10 83.16
NECEvent2014_5_1_scaffold_558 175_007_scaffold_558
Species: Propionibacterium sp. HGH0353 (71.43%)
7 7757 bp 60.23 7.12 89.69
NECEvent2014_5_1_scaffold_2821 175_007_scaffold_2821
Species: Propionibacterium humerusii (50%)
2 1705 bp 60.82 7.13 99.24
NECEvent2014_5_1_scaffold_4258 175_007_scaffold_4258
Species: Propionibacterium sp. HGH0353 (100%)
2 1156 bp 70.50 7.14 100.95
NECEvent2014_5_1_scaffold_3268 175_007_scaffold_3268
Species: Propionibacterium sp. KPL2005 (50%)
2 1499 bp 65.91 7.20 99.87
NECEvent2014_5_1_scaffold_807 175_007_scaffold_807
Species: Propionibacterium sp. HGH0353 (100%)
5 5461 bp 62.48 7.20 98.94
NECEvent2014_5_1_scaffold_516 175_007_scaffold_516
Species: Propionibacterium sp. HGH0353 (85.71%)
7 8381 bp 61.83 7.25 93.18
NECEvent2014_5_1_scaffold_1041 175_007_scaffold_1041
Species: Propionibacterium acnes (50%)
4 4234 bp 62.47 7.26 98.77
NECEvent2014_5_1_scaffold_2342 175_007_scaffold_2342
Species: Propionibacterium sp. HGH0353 (50%)
2 2000 bp 60.00 7.28 86.40
NECEvent2014_5_1_scaffold_4336 175_007_scaffold_4336
Species: Propionibacterium sp. KPL1838 (100%)
1 1132 bp 66.34 7.29 74.47
NECEvent2014_5_1_scaffold_2883 175_007_scaffold_2883
Species: Propionibacterium sp. HGH0353 (100%)
2 1680 bp 61.07 7.32 98.04
NECEvent2014_5_1_scaffold_1384 175_007_scaffold_1384
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3173 bp 62.46 7.33 93.32
NECEvent2014_5_1_scaffold_1707 175_007_scaffold_1707
Species: Propionibacterium sp. KPL1852 (66.67%)
3 2613 bp 63.30 7.35 97.01
NECEvent2014_5_1_scaffold_1854 175_007_scaffold_1854
Genus: Propionibacterium (100%)
3 2466 bp 55.76 7.36 73.36
NECEvent2014_5_1_scaffold_884 175_007_scaffold_884
Species: Propionibacterium sp. HGH0353 (100%)
7 4990 bp 62.51 7.36 85.97
NECEvent2014_5_1_scaffold_753 175_007_scaffold_753
Species: Propionibacterium sp. HGH0353 (100%)
4 5881 bp 60.06 7.37 81.36
NECEvent2014_5_1_scaffold_771 175_007_scaffold_771
Species: Propionibacterium sp. HGH0353 (50%)
8 5718 bp 57.75 7.37 84.61
NECEvent2014_5_1_scaffold_4658 175_007_scaffold_4658
Genus: Propionibacterium (100%)
3 1058 bp 61.63 7.37 103.78
NECEvent2014_5_1_scaffold_2861 175_007_scaffold_2861
Species: Propionibacterium acnes (50%)
2 1687 bp 61.29 7.38 100.30
NECEvent2014_5_1_scaffold_497 175_007_scaffold_497
Species: Propionibacterium sp. HGH0353 (80%)
5 8773 bp 58.06 7.39 89.11
NECEvent2014_5_1_scaffold_1319 175_007_scaffold_1319
Species: Propionibacterium sp. HGH0353 (100%)
5 3343 bp 62.25 7.40 92.70
NECEvent2014_5_1_scaffold_2193 175_007_scaffold_2193
Species: Propionibacterium sp. KPL1852 (50%)
2 2116 bp 61.91 7.51 80.25
NECEvent2014_5_1_scaffold_960 175_007_scaffold_960
Species: Propionibacterium sp. HGH0353 (50%)
6 4643 bp 60.50 7.56 92.66
NECEvent2014_5_1_scaffold_1163 175_007_scaffold_1163
Genus: Propionibacterium (100%)
3 3783 bp 61.72 7.57 89.45
NECEvent2014_5_1_scaffold_2752 175_007_scaffold_2752
Species: Propionibacterium sp. KPL1852 (50%)
4 1743 bp 60.64 7.57 47.16
NECEvent2014_5_1_scaffold_578 175_007_scaffold_578
Species: Propionibacterium sp. HGH0353 (60%)
10 7545 bp 61.52 7.63 91.17
NECEvent2014_5_1_scaffold_1810 175_007_scaffold_1810
Species: Propionibacterium sp. KPL2005 (66.67%)
3 2511 bp 60.06 7.65 89.73
NECEvent2014_5_1_scaffold_1088 175_007_scaffold_1088
Species: Propionibacterium sp. HGH0353 (75%)
4 4060 bp 62.24 7.65 97.02
NECEvent2014_5_1_scaffold_3374 175_007_scaffold_3374
Genus: Propionibacterium (100%)
3 1449 bp 63.70 7.66 83.02
NECEvent2014_5_1_scaffold_3816 175_007_scaffold_3816
Species: Propionibacterium avidum (50%)
2 1289 bp 48.33 7.68 89.14
NECEvent2014_5_1_scaffold_2797 175_007_scaffold_2797
Species: Propionibacterium sp. HGH0353 (100%)
1 1716 bp 59.67 7.69 26.22
NECEvent2014_5_1_scaffold_3823 175_007_scaffold_3823
Species: Propionibacterium sp. KPL2005 (50%)
2 1288 bp 62.58 7.69 76.63
NECEvent2014_5_1_scaffold_1298 175_007_scaffold_1298
Genus: Propionibacterium (60%)
5 3393 bp 61.30 7.69 90.89
NECEvent2014_5_1_scaffold_799 175_007_scaffold_799
Species: Propionibacterium sp. HGH0353 (57.14%)
7 5491 bp 60.52 7.70 77.91
NECEvent2014_5_1_scaffold_1166 175_007_scaffold_1166
Species: Propionibacterium avidum (60%)
5 3776 bp 66.34 7.71 95.58
NECEvent2014_5_1_scaffold_875 175_007_scaffold_875
Species: Propionibacterium sp. KPL2005 (60%)
5 5037 bp 64.26 7.71 99.34
NECEvent2014_5_1_scaffold_2041 175_007_scaffold_2041
Species: Propionibacterium sp. HGH0353 (100%)
2 2268 bp 60.23 7.74 89.15
Displaying items 51-100 of 546 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.