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NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

NECEvent2014_5_1_Propionibacterium_sp__HGH0353_63_13
In projects: NECEvent2014_5_1

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Description

16S rRNA gene is 99% to Propionibacterium sp. H456

Displaying items 101-150 of 546 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_1_scaffold_1098 175_007_scaffold_1098
Species: Propionibacterium avidum (50%)
4 4040 bp 64.83 14.37 83.39
NECEvent2014_5_1_scaffold_1187 175_007_scaffold_1187
Species: Propionibacterium sp. HGH0353 (80%)
5 3696 bp 62.61 14.20 83.52
NECEvent2014_5_1_scaffold_4256 175_007_scaffold_4256
Species: Propionibacterium sp. HGH0353 (50%)
2 1156 bp 63.24 6.88 83.56
NECEvent2014_5_1_scaffold_1982 175_007_scaffold_1982
Genus: Propionibacterium (50%)
4 2322 bp 63.87 4.46 83.72
NECEvent2014_5_1_scaffold_2796 175_007_scaffold_2796
Species: Propionibacterium acnes (66.67%)
3 1718 bp 62.05 14.41 83.82
NECEvent2014_5_1_scaffold_1636 175_007_scaffold_1636
Genus: Propionibacterium (50%)
6 2715 bp 60.04 6.41 83.98
NECEvent2014_5_1_scaffold_1059 175_007_scaffold_1059
Genus: Propionibacterium (100%)
4 4162 bp 58.65 10.63 84.12
NECEvent2014_5_1_scaffold_1222 175_007_scaffold_1222
Species: Propionibacterium sp. KPL1852 (60%)
5 3579 bp 64.60 9.72 84.24
NECEvent2014_5_1_scaffold_3080 175_007_scaffold_3080
Species: Propionibacterium avidum (50%)
2 1575 bp 63.68 8.76 84.32
NECEvent2014_5_1_scaffold_2986 175_007_scaffold_2986
Species: Propionibacterium sp. KPL1852 (50%)
4 1629 bp 63.60 15.01 84.35
NECEvent2014_5_1_scaffold_1780 175_007_scaffold_1780
Species: Propionibacterium sp. HGH0353 (50%)
4 2534 bp 61.48 11.54 84.41
NECEvent2014_5_1_scaffold_964 175_007_scaffold_964
Species: Propionibacterium sp. HGH0353 (60%)
5 4605 bp 62.69 13.39 84.43
NECEvent2014_5_1_scaffold_1984 175_007_scaffold_1984
Species: Propionibacterium sp. HGH0353 (50%)
4 2321 bp 61.65 14.80 84.53
NECEvent2014_5_1_scaffold_771 175_007_scaffold_771
Species: Propionibacterium sp. HGH0353 (50%)
8 5718 bp 57.75 7.37 84.61
NECEvent2014_5_1_scaffold_738 175_007_scaffold_738
Species: Propionibacterium sp. KPL1852 (66.67%)
6 6030 bp 64.38 7.99 84.63
NECEvent2014_5_1_scaffold_3043 175_007_scaffold_3043
Species: Propionibacterium sp. KPL1838 (50%)
2 1599 bp 61.29 11.82 84.80
NECEvent2014_5_1_scaffold_1500 175_007_scaffold_1500
Species: Propionibacterium sp. KPL1838 (50%)
2 2925 bp 66.05 9.95 84.82
NECEvent2014_5_1_scaffold_1506 175_007_scaffold_1506
Species: Propionibacterium sp. HGH0353 (100%)
4 2914 bp 61.15 6.33 84.83
NECEvent2014_5_1_scaffold_1116 175_007_scaffold_1116
Species: Propionibacterium sp. HGH0353 (83.33%)
6 3958 bp 62.03 11.90 84.92
NECEvent2014_5_1_scaffold_536 175_007_scaffold_536
Genus: Propionibacterium (87.5%)
8 8026 bp 63.74 16.91 85.00
NECEvent2014_5_1_scaffold_434 175_007_scaffold_434
Species: Propionibacterium granulosum (75%)
8 9944 bp 63.12 7.98 85.05
NECEvent2014_5_1_scaffold_4910 175_007_scaffold_4910
Species: Propionibacterium sp. KPL2005 (100%)
2 1005 bp 57.61 18.96 85.07
NECEvent2014_5_1_scaffold_614 175_007_scaffold_614
Genus: Propionibacterium (100%)
8 7159 bp 63.98 14.65 85.11
NECEvent2014_5_1_scaffold_4265 175_007_scaffold_4265
Genus: Propionibacterium (66.67%)
3 1153 bp 63.05 14.31 85.17
NECEvent2014_5_1_scaffold_2045 175_007_scaffold_2045
Species: Propionibacterium sp. KPL1852 (66.67%)
3 2264 bp 63.47 9.67 85.34
NECEvent2014_5_1_scaffold_994 175_007_scaffold_994
Species: Propionibacterium sp. HGH0353 (100%)
3 4426 bp 61.61 14.00 85.40
NECEvent2014_5_1_scaffold_3304 175_007_scaffold_3304
Species: Propionibacterium sp. HGH0353 (50%)
2 1478 bp 63.46 16.04 85.45
NECEvent2014_5_1_scaffold_429 175_007_scaffold_429
Species: Propionibacterium sp. HGH0353 (73.33%)
15 10150 bp 62.87 15.47 85.54
NECEvent2014_5_1_scaffold_1692 175_007_scaffold_1692
Species: Propionibacterium sp. HGH0353 (100%)
4 2634 bp 58.47 15.89 85.65
NECEvent2014_5_1_scaffold_1736 175_007_scaffold_1736
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2586 bp 65.93 11.25 85.73
NECEvent2014_5_1_scaffold_2666 175_007_scaffold_2666
Species: Propionibacterium sp. HGH0353 (50%)
2 1794 bp 65.05 4.35 85.79
NECEvent2014_5_1_scaffold_543 175_007_scaffold_543
Species: Propionibacterium sp. HGH0353 (100%)
8 7903 bp 64.32 14.01 85.87
NECEvent2014_5_1_scaffold_2325 175_007_scaffold_2325
Genus: Propionibacterium (100%)
3 2014 bp 58.24 6.93 85.95
NECEvent2014_5_1_scaffold_884 175_007_scaffold_884
Species: Propionibacterium sp. HGH0353 (100%)
7 4990 bp 62.51 7.36 85.97
NECEvent2014_5_1_scaffold_3427 175_007_scaffold_3427
Species: Propionibacterium sp. HGH0353 (100%)
1 1427 bp 66.85 35.32 85.98
NECEvent2014_5_1_scaffold_2472 175_007_scaffold_2472
Species: Propionibacterium sp. HGH0353 (100%)
2 1910 bp 62.36 6.36 86.07
NECEvent2014_5_1_scaffold_2872 175_007_scaffold_2872
Species: Propionibacterium sp. HGH0353 (100%)
3 1685 bp 62.14 9.08 86.17
NECEvent2014_5_1_scaffold_450 175_007_scaffold_450
Species: Propionibacterium sp. HGH0353 (100%)
8 9654 bp 64.85 13.89 86.23
NECEvent2014_5_1_scaffold_833 175_007_scaffold_833
Species: Propionibacterium sp. HGH0353 (66.67%)
6 5325 bp 63.70 10.48 86.25
NECEvent2014_5_1_scaffold_479 175_007_scaffold_479
Species: Propionibacterium sp. HGH0353 (83.33%)
12 9046 bp 65.27 14.72 86.26
NECEvent2014_5_1_scaffold_399 175_007_scaffold_399
Species: Propionibacterium sp. KPL1852 (50%)
8 11066 bp 63.60 15.72 86.40
NECEvent2014_5_1_scaffold_2342 175_007_scaffold_2342
Species: Propionibacterium sp. HGH0353 (50%)
2 2000 bp 60.00 7.28 86.40
NECEvent2014_5_1_scaffold_1507 175_007_scaffold_1507
Species: Propionibacterium sp. HGH0353 (75%)
4 2911 bp 64.31 14.63 86.47
NECEvent2014_5_1_scaffold_265 175_007_scaffold_265
Species: Propionibacterium sp. HGH0353 (70.59%)
17 16778 bp 63.74 15.85 86.63
NECEvent2014_5_1_scaffold_4257 175_007_scaffold_4257
Species: Propionibacterium sp. HGH0353 (100%)
2 1156 bp 64.10 13.62 86.68
NECEvent2014_5_1_scaffold_4418 175_007_scaffold_4418
Species: Propionibacterium sp. KPL1852 (50%)
2 1111 bp 58.06 12.83 86.68
NECEvent2014_5_1_scaffold_126 175_007_scaffold_126
Genus: Propionibacterium (91.18%)
34 35143 bp 63.09 15.22 86.75
NECEvent2014_5_1_scaffold_2133 175_007_scaffold_2133
Genus: Propionibacterium (66.67%)
3 2174 bp 60.86 17.04 86.80
NECEvent2014_5_1_scaffold_2852 175_007_scaffold_2852
Species: Propionibacterium sp. KPL1852 (50%)
2 1690 bp 65.98 8.34 86.80
NECEvent2014_5_1_scaffold_1363 175_007_scaffold_1363
Species: Propionibacterium sp. HGH0353 (100%)
5 3234 bp 65.40 7.88 86.83
Displaying items 101-150 of 546 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.