ggKbase home page

NECEvent2014_5_1_scaffold_319

Alias: 175_007_scaffold_319

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_319_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(2..820)
DNA (819bp) protein (273aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Staphylococcus epidermidis NIHLM001 RepID=J0HZ56_STAEP rbh
FIG134348: essential endopeptidase
NECEvent2014_5_1_scaffold_319_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(817..1278)
DNA (462bp) protein (154aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine N-acetyltransfer n=50 Tax=Staphylococcus epidermidis RepID=Q8CNL8_STAES rbh
Alanine acetyltransferase {ECO:0000313|EMBL:ESV20059.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_5_1_scaffold_319_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1251..1913)
DNA (663bp) protein (221aa)
Uncharacterized protein n=41 Tax=Staphylococcus RepID=Q5HMG5_STAEQ rbh
Inactive homolog of metal-dependent proteases,putative molecular chaperone
Uncharacterized protein {ECO:0000313|EMBL:AAW55001.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_1_scaffold_319_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1894..2355)
DNA (462bp) protein (154aa)
Uncharacterized protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HMG4_STAEQ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW55002.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_1_scaffold_319_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2672..4522
DNA (1851bp) protein (617aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=3 Tax=Staphylococcus epidermidis RepID=C5Q692_STAEP rbh
NECEvent2014_5_1_scaffold_319_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4539..6281
DNA (1743bp) protein (581aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloc
Acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase n=16 Tax=Staphylococcus RepID=D4FM61_STAEP rbh
NECEvent2014_5_1_scaffold_319_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6281..6514
DNA (234bp) protein (78aa)
Acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit, truncation n=79 Tax=Staphylococcus epidermidis RepID=Q5HMG1_STAEQ
ACT domain protein {ECO:0000313|EMBL:EFE58453.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_1_scaffold_319_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6631..7635
DNA (1005bp) protein (335aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
Ketol-acid reductoisomerase n=27 Tax=Bacteria RepID=ILVC_STAEQ rbh
NECEvent2014_5_1_scaffold_319_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7658..9193
DNA (1536bp) protein (512aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_01025};; Alpha-IPM synthase {ECO:0000255|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:
2-isopropylmalate synthase n=20 Tax=Staphylococcus epidermidis RepID=LEU1_STAEQ rbh
NECEvent2014_5_1_scaffold_319_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9190..10233
DNA (1044bp) protein (348aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=19 Tax=Staphylococcus epidermidis RepID=D4FM57_STAEP rbh
NECEvent2014_5_1_scaffold_319_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10249..11619
DNA (1371bp) protein (457aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=20 Tax=Staphylococcus epidermidis RepID=D4FM56_STAEP rbh
NECEvent2014_5_1_scaffold_319_12

Not on your lists

11620..12189
DNA (570bp) protein (190aa)
leuD; 3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Staphylococcus epidermidis NIHLM088 RepID=J0E125_STAEP rbh
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:ETJ20121.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_1_scaffold_319_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12198..13472
DNA (1275bp) protein (425aa)
Threonine dehydratase (EC:4.3.1.19)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=525375 species="Bacteria; Firmicutes;
Threonine ammonia-lyase n=16 Tax=Staphylococcus epidermidis RepID=C5Q684_STAEP rbh
NECEvent2014_5_1_scaffold_319_14
unknown

Not on your lists

comp(13570..13641)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 14 items

View Taxonomy