ggKbase home page

NECEvent2014_5_1_scaffold_1574_2

Organism: NECEvent2014_5_1_Staphylococcus_epidermidis_33_6

near complete RP 46 / 55 MC: 4 BSCG 45 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 2048..2782

Top 3 Functional Annotations

Value Algorithm Source
Choline ABC transporter, ATP-binding protein OpuBA n=6 Tax=Staphylococcus epidermidis RepID=F3T0V2_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 245.0
  • Bit_score: 496
  • Evalue 1.80e-137
  • rbh
choline transport ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 245.0
  • Bit_score: 493
  • Evalue 4.30e-137
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:ETJ19867.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut meta similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 245.0
  • Bit_score: 492
  • Evalue 2.80e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

human gut metagenome

Sequences

DNA sequence
Length: 735
GTGATTAAATTTAAAAATGTCACAAAGCGATATGCTAATAATATTGCTGTAGATAATGTAAGTTTTAATATTAAAGAAGGAGAATTTTTTGTGTTAATTGGTCCTTCAGGTTGTGGTAAGACAACAACACTTAAAATGATCAATCGTTTAATTCCTTTAAGCGAAGGTTACATATATTTTAAAGATAAACCAATTAGTGATTATCCAGTTTACGAAATGCGTTGGGATATTGGATATGTACTACAACAAATTGCATTATTTCCTCATATGACTATCAAAGAAAACATTGCACAAGTACCCCAAATGAAAAAGTGGAAAGATAACGATATTGATTTACGTGTGGATGAATTATTGACAATGGTAGGTTTAAATCCTGAGCAATTTAAAAATAGAAAACCTGATGAACTATCGGGTGGACAACGACAAAGGGTTGGTGTAGTGCGAGCATTAGCTGCAGATCCTCCCGTTATTATCATGGATGAGCCTTTTAGTGCTCTTGACCCAATTAGCAGAGAGAAGTTGCAGGACGATTTGATTTATTTGCAAACTCAAATTAAGAAAACAATAGTTTTTGTAACGCATGATATTCAAGAAGCGATGAAACTAGGTGACAGAATTTGTTTACTCAATGAAGGGCGTGTTGAACAAATTGATACACCTGATGGTTTTAGAGCGCGACCTAAAAGTGACTTTGTAAAGCAATTCATGGGTAGTCATTTGGATACAACGCATAAT
PROTEIN sequence
Length: 245
VIKFKNVTKRYANNIAVDNVSFNIKEGEFFVLIGPSGCGKTTTLKMINRLIPLSEGYIYFKDKPISDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQMKKWKDNDIDLRVDELLTMVGLNPEQFKNRKPDELSGGQRQRVGVVRALAADPPVIIMDEPFSALDPISREKLQDDLIYLQTQIKKTIVFVTHDIQEAMKLGDRICLLNEGRVEQIDTPDGFRARPKSDFVKQFMGSHLDTTHN